File: 2.expected.sam

package info (click to toggle)
samtools 1.22.1-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 22,092 kB
  • sloc: ansic: 36,084; perl: 7,882; sh: 475; makefile: 302; java: 158
file content (26 lines) | stat: -rw-r--r-- 1,705 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
@HD	VN:1.6	SO:unsorted	GO:query
@CO	Reverse with: samtools fastq -N -o paired.fastq 
ref1_grp1_p001	77	*	0	0	*	*	0	0	CGAGCTCGGT	!!!!!!!!!!	BC:Z:AAA+CCC
ref1_grp1_p001	141	*	0	0	*	*	0	0	GTCGACTCTA	----------	BC:Z:AAA+CCC
ref1_grp1_p002	77	*	0	0	*	*	0	0	CTCGGTACCC	##########	BC:Z:AAA+CCC
ref1_grp1_p002	141	*	0	0	*	*	0	0	GCAGGTCGAC	//////////	BC:Z:AAA+CCC
ref1_grp1_p003	77	*	0	0	*	*	0	0	GTACCCGGGG	%%%%%%%%%%	BC:Z:AAA+CCC
ref1_grp1_p003	141	*	0	0	*	*	0	0	GCCTGCAGGT	1111111111	BC:Z:AAA+CCC
ref1_grp1_p004	77	*	0	0	*	*	0	0	CCGGGGATCC	''''''''''	BC:Z:AAA+CCC
ref1_grp1_p004	141	*	0	0	*	*	0	0	GCATGCCTGC	3333333333	BC:Z:AAA+CCC
ref1_grp1_p005	77	*	0	0	*	*	0	0	GGATCCTCTA	))))))))))	BC:Z:AAA+CCC
ref1_grp1_p005	141	*	0	0	*	*	0	0	GCTTGCATGC	5555555555	BC:Z:AAA+CCC
ref1_grp1_p006	77	*	0	0	*	*	0	0	CCTCTAGAGT	++++++++++	BC:Z:AAA+CCC
ref1_grp1_p006	141	*	0	0	*	*	0	0	TCAAGCTTGC	7777777777	BC:Z:AAA+CCC
ref1_grp2_p001	77	*	0	0	*	*	0	0	AGCTCGGTAC	""""""""""	BC:Z:AAA+CCC
ref1_grp2_p001	141	*	0	0	*	*	0	0	AGGTCGACTC	..........	BC:Z:AAA+CCC
ref1_grp2_p002	77	*	0	0	*	*	0	0	CGGTACCCGG	$$$$$$$$$$	BC:Z:AAA+CCC
ref1_grp2_p002	141	*	0	0	*	*	0	0	CTGCAGGTCG	0000000000	BC:Z:AAA+CCC
ref1_grp2_p003	77	*	0	0	*	*	0	0	ACCCGGGGAT	&&&&&&&&&&	BC:Z:AAA+CCC
ref1_grp2_p003	141	*	0	0	*	*	0	0	ATGCCTGCAG	2222222222	BC:Z:AAA+CCC
ref1_grp2_p004	77	*	0	0	*	*	0	0	GGGGATCCTC	((((((((((	BC:Z:AAA+CCC
ref1_grp2_p004	141	*	0	0	*	*	0	0	TTGCATGCCT	4444444444	BC:Z:AAA+CCC
ref1_grp2_p005	77	*	0	0	*	*	0	0	ATCCTCTAGA	**********	BC:Z:AAA+CCC
ref1_grp2_p005	141	*	0	0	*	*	0	0	AAGCTTGCAT	6666666666	BC:Z:AAA+CCC
ref1_grp2_p006	77	*	0	0	*	*	0	0	TCTAGAGTCG	,,,,,,,,,,	BC:Z:AAA+CCC
ref1_grp2_p006	141	*	0	0	*	*	0	0	ACTCAAGCTT	8888888888	BC:Z:AAA+CCC