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function varargout = GetCompartmentTypes(SBMLModel)
% names = GetCompartmentTypes(SBMLModel)
%
% Takes
%
% 1. SBMLModel, an SBML Model structure
%
% Returns
%
% 1. an array of strings representing the identifiers of all compartmentTypes within the model
%
%<!---------------------------------------------------------------------------
% This file is part of SBMLToolbox. Please visit http://sbml.org for more
% information about SBML, and the latest version of SBMLToolbox.
%
% Copyright (C) 2009-2012 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. EMBL European Bioinformatics Institute (EBML-EBI), Hinxton, UK
%
% Copyright (C) 2006-2008 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. University of Hertfordshire, Hatfield, UK
%
% Copyright (C) 2003-2005 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. Japan Science and Technology Agency, Japan
% 3. University of Hertfordshire, Hatfield, UK
%
% SBMLToolbox is free software; you can redistribute it and/or modify it
% under the terms of the GNU Lesser General Public License as published by
% the Free Software Foundation. A copy of the license agreement is provided
% in the file named "LICENSE.txt" included with this software distribution.
%----------------------------------------------------------------------- -->
% check input is an SBML model
if (~isValidSBML_Model(SBMLModel))
error('GetCompartmentTypes(SBMLModel)\n%s', 'input must be an SBMLModel structure');
end;
%------------------------------------------------------------
% determine the number of compartmentTypes within the model
NumCompartmentTypes = length(SBMLModel.compartmentType);
%------------------------------------------------------------
% loop through the list of compartments
for i = 1:NumCompartmentTypes
% and array of the character names
CharArray{i} = SBMLModel.compartmentType(i).id;
end;
%--------------------------------------------------------------------------
% assign output
if (NumCompartmentTypes ~= 0)
varargout{1} = CharArray;
else
varargout{1} = [];
end;
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