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function AssignRules = Model_getListOfAssignmentRules(SBMLModel)
% assignmentRule = Model_getListOfAssignmentRules(SBMLModel)
%
% Takes
%
% 1. SBMLModel, an SBML Model structure
%
% Returns
%
% 1. an array of the assignmentRule structures
%
%<!---------------------------------------------------------------------------
% This file is part of SBMLToolbox. Please visit http://sbml.org for more
% information about SBML, and the latest version of SBMLToolbox.
%
% Copyright (C) 2009-2012 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. EMBL European Bioinformatics Institute (EBML-EBI), Hinxton, UK
%
% Copyright (C) 2006-2008 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. University of Hertfordshire, Hatfield, UK
%
% Copyright (C) 2003-2005 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. Japan Science and Technology Agency, Japan
% 3. University of Hertfordshire, Hatfield, UK
%
% SBMLToolbox is free software; you can redistribute it and/or modify it
% under the terms of the GNU Lesser General Public License as published by
% the Free Software Foundation. A copy of the license agreement is provided
% in the file named "LICENSE.txt" included with this software distribution.
%----------------------------------------------------------------------- -->
j = 1;
for i = 1:length(SBMLModel.rule)
if (strcmp(SBMLModel.rule(i).typecode, 'SBML_ASSIGNMENT_RULE'))
AssignRules(j) = SBMLModel.rule(i);
j = j + 1;
elseif (SBMLModel.SBML_level == 1)
if ((strcmp(SBMLModel.rule(i).typecode, 'SBML_SPECIES_CONCENTRATION_RULE')) & (strcmp(SBMLModel.rule(i).type, 'scalar')))
AssignRules(j) = SBMLModel.rule(i);
j = j + 1;
elseif ((strcmp(SBMLModel.rule(i).typecode, 'SBML_COMPARTMENT_VOLUME_RULE')) & (strcmp(SBMLModel.rule(i).type, 'scalar')))
AssignRules(j) = SBMLModel.rule(i);
j = j + 1;
elseif ((strcmp(SBMLModel.rule(i).typecode, 'SBML_PARAMETER_RULE')) & (strcmp(SBMLModel.rule(i).type, 'scalar')))
AssignRules(j) = SBMLModel.rule(i);
j = j + 1;
end;
end;
end;
if (j == 1)
AssignRules = '';
end;
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