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function model = propagateLevelVersion(SBMLModel)
% SBMLModel = propagateLevelVersion(SBMLModel)
%
% Takes
%
% 1. SBMLModel, an SBML Model structure
%
% Returns
%
% 1. the SBML Model structure with level and version fields added to all
% sub structures
%
% *NOTE:* This function facilitates keeping track of the level and version
% of sub objects within a model
%<!---------------------------------------------------------------------------
% This file is part of SBMLToolbox. Please visit http://sbml.org for more
% information about SBML, and the latest version of SBMLToolbox.
%
% Copyright (C) 2009-2012 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. EMBL European Bioinformatics Institute (EBML-EBI), Hinxton, UK
%
% Copyright (C) 2006-2008 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. University of Hertfordshire, Hatfield, UK
%
% Copyright (C) 2003-2005 jointly by the following organizations:
% 1. California Institute of Technology, Pasadena, CA, USA
% 2. Japan Science and Technology Agency, Japan
% 3. University of Hertfordshire, Hatfield, UK
%
% SBMLToolbox is free software; you can redistribute it and/or modify it
% under the terms of the GNU Lesser General Public License as published by
% the Free Software Foundation. A copy of the license agreement is provided
% in the file named "LICENSE.txt" included with this software distribution.
%----------------------------------------------------------------------- -->
%get level and version and check the input arguments are appropriate
if ~isValidSBML_Model(SBMLModel)
error('first argument must be an SBMLModel structure');
end;
level = SBMLModel.SBML_level;
version = SBMLModel.SBML_version;
model = addLV('SBML_MODEL', SBMLModel, level, version);
function model = addLV(typecode, model, level, version)
fields = getFieldnames(typecode, level, version);
for i=1:length(fields)
subcomp = getfield(model, fields{i});
if isstruct(subcomp)
if length(subcomp) > 0
model = setfield(model, fields{i}, addLevelVersion(subcomp, level, version));
end;
end;
end;
function retStr = addLevelVersion(substr, level, version)
if length(substr) == 1
retStr = addLevelVersionStruct(substr, level, version);
retStr = addLV(substr.typecode, retStr, level, version);
else
for i=1:length(substr)
retStr(i) = addLevelVersionStruct(substr(i), level, version);
retStr(i) = addLV(substr(i).typecode, retStr(i), level, version);
end;
end;
function retStr = addLevelVersionStruct(substr, level, version)
retStr = substr;
retStr.level = level;
retStr.version = version;
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