1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315
|
{
s_m_m2io_version
:::
2.0.0
}
f_m_ct {
s_m_title
i_m_ct_stereo_status
i_m_ct_enhanced_stereo_status
s_st_Chirality_1
s_m_entry_id
s_m_entry_name
s_sd_ID
s_sd_All_IDs
s_sd_Rationale
s_sd_Lot_Scientist
s_sd_Approved_Drug
r_sd_Quick_Properties_(MW)
s_sd_PUBCHEM\_CACTVS\_SUBSKEYS_(undefined)
s_sd_PUBCHEM\_IUPAC\_OPENEYE\_NAME_(undefined)
s_sd_PUBCHEM\_IUPAC\_CAS\_NAME_(undefined)
s_sd_PUBCHEM\_IUPAC\_NAME\_MARKUP_(undefined)
s_sd_PUBCHEM\_IUPAC\_NAME_(undefined)
s_sd_PUBCHEM\_IUPAC\_SYSTEMATIC\_NAME_(undefined)
s_sd_PUBCHEM\_IUPAC\_TRADITIONAL\_NAME_(undefined)
s_sd_PUBCHEM\_IUPAC\_INCHI_(undefined)
s_sd_PUBCHEM\_IUPAC\_INCHIKEY_(undefined)
s_sd_PUBCHEM\_MOLECULAR\_FORMULA_(undefined)
s_sd_PUBCHEM\_OPENEYE\_CAN\_SMILES_(undefined)
s_sd_PUBCHEM\_OPENEYE\_ISO\_SMILES_(undefined)
s_sd_PUBCHEM\_NONSTANDARDBOND_(undefined)
s_sd_PUBCHEM\_BONDANNOTATIONS_(undefined)
s_sd_PUBCHEM\_CONFORMER\_RMSD_(undefined)
s_sd_PUBCHEM\_CONFORMER\_DIVERSEORDER_(undefined)
s_sd_PUBCHEM\_MMFF94\_PARTIAL\_CHARGES_(undefined)
s_sd_PUBCHEM\_EFFECTIVE\_ROTOR\_COUNT_(undefined)
s_sd_PUBCHEM\_PHARMACOPHORE\_FEATURES_(undefined)
s_sd_PUBCHEM\_CONFORMER\_ID_(undefined)
s_sd_PUBCHEM\_MMFF94\_ENERGY_(undefined)
s_sd_PUBCHEM\_FEATURE\_SELFOVERLAP_(undefined)
s_sd_PUBCHEM\_SHAPE\_FINGERPRINT_(undefined)
s_sd_PUBCHEM\_SHAPE\_MULTIPOLES_(undefined)
s_sd_PUBCHEM\_SHAPE\_SELFOVERLAP_(undefined)
s_sd_PUBCHEM\_SHAPE\_VOLUME_(undefined)
b_sd_chiral_flag
i_sd_version
s_m_Source_Path
s_m_Source_File
i_m_Source_File_Index
i_sd_PUBCHEM\_COMPOUND\_CID_(undefined)
i_sd_PUBCHEM\_COMPOUND\_CANONICALIZED_(undefined)
r_sd_PUBCHEM\_CACTVS\_COMPLEXITY_(undefined)
r_sd_PUBCHEM\_CACTVS\_HBOND\_ACCEPTOR_(undefined)
i_sd_PUBCHEM\_CACTVS\_HBOND\_DONOR_(undefined)
r_sd_PUBCHEM\_CACTVS\_ROTATABLE\_BOND_(undefined)
r_sd_PUBCHEM\_EXACT\_MASS_(undefined)
r_sd_PUBCHEM\_MOLECULAR\_WEIGHT_(undefined)
r_sd_PUBCHEM\_CACTVS\_TPSA_(undefined)
r_sd_PUBCHEM\_MONOISOTOPIC\_WEIGHT_(undefined)
i_sd_PUBCHEM\_TOTAL\_CHARGE_(undefined)
i_sd_PUBCHEM\_HEAVY\_ATOM\_COUNT_(undefined)
i_sd_PUBCHEM\_ATOM\_DEF\_STEREO\_COUNT_(undefined)
r_sd_PUBCHEM\_ATOM\_UDEF\_STEREO\_COUNT_(undefined)
i_sd_PUBCHEM\_BOND\_DEF\_STEREO\_COUNT_(undefined)
i_sd_PUBCHEM\_BOND\_UDEF\_STEREO\_COUNT_(undefined)
i_sd_PUBCHEM\_ISOTOPIC\_ATOM\_COUNT_(undefined)
r_sd_PUBCHEM\_COMPONENT\_COUNT_(undefined)
i_sd_PUBCHEM\_CACTVS\_TAUTO\_COUNT_(undefined)
r_sd_PUBCHEM\_COORDINATE\_TYPE_(undefined)
r_sd_PUBCHEM\_XLOGP3\_AA_(undefined)
s_m_subgroup_title
s_m_subgroupid
b_m_subgroup_collapsed
i_m_ct_format
:::
V226050
1
0
41_S_9_8_49_54
6
macrocycles.6
V226050
V226050
""
demo
""
822.8939
AAADcfB/PAAAAAAAAAAAAAAAGAAAASAAAAA0QIAAAAAAAEiBAAAAHgAQCAAADTzxmAcCDoLABgCoA6XyXAKCCAAkIgAIiAH0CNgeNzaGtT+neWCl5BWMuYf67vzu4AADCAAYAADAAAYQADAAAAAAAAAAAA==
"[(7S)-2,15,17-trihydroxy-28-(6-hydroxy-2-methyl-tetrahydropyran-3-yl)imino-11-methoxy-3,7,12,14,16,23-hexamethyl-6,21,24,30-tetraoxo-8,31-dioxa-25-azapentacyclo[24.3.1.14,7.05,29.018,20]hentriaconta-1(29),2,4,9,22,26-hexaen-13-yl] acetate"
"acetic acid [(7S)-2,15,17-trihydroxy-28-[(6-hydroxy-2-methyl-3-oxanyl)imino]-11-methoxy-3,7,12,14,16,23-hexamethyl-6,21,24,30-tetraoxo-8,31-dioxa-25-azapentacyclo[24.3.1.14,7.05,29.018,20]hentriaconta-1(29),2,4,9,22,26-hexaen-13-yl] ester"
"[(7<I>S</I>)-2,15,17-trihydroxy-28-(6-hydroxy-2-methyloxan-3-yl)imino-11-methoxy-3,7,12,14,16,23-hexamethyl-6,21,24,30-tetraoxo-8,31-dioxa-25-azapentacyclo[24.3.1.1<SUP>4,7</SUP>.0<SUP>5,29</SUP>.0<SUP>18,20</SUP>]hentriaconta-1(29),2,4,9,22,26-hexaen-13-yl] acetate"
"[(7S)-2,15,17-trihydroxy-28-(6-hydroxy-2-methyloxan-3-yl)imino-11-methoxy-3,7,12,14,16,23-hexamethyl-6,21,24,30-tetraoxo-8,31-dioxa-25-azapentacyclo[24.3.1.14,7.05,29.018,20]hentriaconta-1(29),2,4,9,22,26-hexaen-13-yl] acetate"
"[(7S)-11-methoxy-3,7,12,14,16,23-hexamethyl-28-(2-methyl-6-oxidanyl-oxan-3-yl)imino-2,15,17-tris(oxidanyl)-6,21,24,30-tetrakis(oxidanylidene)-8,31-dioxa-25-azapentacyclo[24.3.1.14,7.05,29.018,20]hentriaconta-1(29),2,4,9,22,26-hexaen-13-yl] ethanoate"
"acetic acid [(7S)-2,15,17-trihydroxy-28-(6-hydroxy-2-methyl-tetrahydropyran-3-yl)imino-6,21,24,30-tetraketo-11-methoxy-3,7,12,14,16,23-hexamethyl-8,31-dioxa-25-azapentacyclo[24.3.1.14,7.05,29.018,20]hentriaconta-1(29),2,4,9,22,26-hexaen-13-yl] ester"
InChI=1S/C43H54N2O14/c1-17-14-29(47)24-15-25(24)36(50)19(3)35(49)20(4)39(58-23(7)46)18(2)30(55-9)12-13-56-43(8)41(53)34-32-27(44-26-10-11-31(48)57-22(26)6)16-28(45-42(17)54)38(52)33(32)37(51)21(5)40(34)59-43/h12-14,16,18-20,22,24-26,30-31,35-36,39,48-51H,10-11,15H2,1-9H3,(H,45,54)/t18?,19?,20?,22?,24?,25?,26?,30?,31?,35?,36?,39?,43-/m0/s1
RYCBEGMWBUYSAD-XGUWRKLTSA-N
C43H54N2O14
CC1C(C=COC2(C(=O)C3=C(O2)C(=C(C4=C3C(=NC5CCC(OC5C)O)C=C(C4=O)NC(=O)C(=CC(=O)C6CC6C(C(C(C(C1OC(=O)C)C)O)C)O)C)O)C)C)OC
CC1C(C=CO[C@@]2(C(=O)C3=C(O2)C(=C(C4=C3C(=NC5CCC(OC5C)O)C=C(C4=O)NC(=O)C(=CC(=O)C6CC6C(C(C(C(C1OC(=O)C)C)O)C)O)C)O)C)C)OC
""
"18 19 3
42 48 8
24 28 3
29 32 3
21 25 3
42 43 8
43 50 8
20 1 3
26 4 3
50 55 8
35 37 1
55 56 8
44 16 3
31 5 3
23 2 3
57 14 3
41 54 6
17 19 3
51 58 3
27 30 1
48 56 8"
""
""
""
""
""
""
""
""
""
""
""
""
1
0
/Users/nicola/Downloads
macrocycles.sdf
6
146158297
1
1810
15
5
4
822.36
822.9
237
822.36
0
59
1
12
0
2
0
1
-1
87
3.5
macrocycles
macrocycles
0
2
m_atom[59] {
# First column is atom index #
i_m_mmod_type
r_m_x_coord
r_m_y_coord
r_m_z_coord
i_m_residue_number
i_m_color
i_m_atomic_number
s_m_color_rgb
i_sd_original_parity
:::
1 17 -2.940200 -1.811800 0.000000 900 70 8 FF2F2F <>
2 17 -1.486900 -3.171100 0.000000 900 70 8 FF2F2F <>
3 15 -3.673500 0.438400 0.000000 900 70 8 FF2F2F <>
4 16 -0.110900 -3.929000 0.000000 900 70 8 FF2F2F <>
5 16 2.343400 -2.474700 0.000000 900 70 8 FF2F2F <>
6 15 -2.780600 3.255800 0.000000 900 70 8 FF2F2F <>
7 15 -0.053500 -5.353400 0.000000 900 70 8 FF2F2F <>
8 16 1.426800 -0.192600 0.000000 900 70 8 FF2F2F <>
9 16 2.483600 1.065700 0.000000 900 70 8 FF2F2F <>
10 16 -0.848100 -0.515500 0.000000 900 70 8 FF2F2F <>
11 15 0.554600 4.313600 0.000000 900 70 8 FF2F2F <>
12 15 0.602200 0.750900 0.000000 900 70 8 FF2F2F <>
13 17 2.097800 3.889500 0.000000 900 70 8 FF2F2F <>
14 17 -0.292000 -1.646400 0.000000 900 70 8 FF2F2F <>
15 29 -1.389100 3.520600 0.000000 900 43 7 5757FF <>
16 25 -0.447900 1.301900 0.000000 900 43 7 5757FF <>
17 4 -2.033000 -0.625100 0.000000 900 2 6 A0A0A0 <>
18 4 -2.265900 0.176300 0.000000 900 2 6 A0A0A0 <>
19 5 -1.485900 -0.034200 0.000000 900 2 6 A0A0A0 <>
20 4 -2.217600 -1.422200 0.000000 900 2 6 A0A0A0 <>
21 4 -1.429200 -1.733400 0.000000 900 2 6 A0A0A0 <>
22 2 -2.895500 0.712100 0.000000 900 2 6 A0A0A0 <>
23 4 -1.050000 -2.477400 0.000000 900 2 6 A0A0A0 <>
24 4 -0.205700 -2.505800 0.000000 900 2 6 A0A0A0 <>
25 6 -0.896000 -1.159400 0.000000 900 2 6 A0A0A0 <>
26 4 0.252600 -3.186700 0.000000 900 2 6 A0A0A0 <>
27 7 -2.731800 1.564100 0.000000 900 2 6 A0A0A0 <>
28 6 0.271700 -1.833300 0.000000 900 2 6 A0A0A0 <>
29 4 1.079400 -3.115200 0.000000 900 2 6 A0A0A0 <>
30 2 -2.028200 2.065300 0.000000 900 2 6 A0A0A0 <>
31 4 1.514200 -2.403900 0.000000 900 2 6 A0A0A0 <>
32 6 1.515900 -3.815300 0.000000 900 2 6 A0A0A0 <>
33 6 -1.302300 1.683100 0.000000 900 2 6 A0A0A0 <>
34 2 -2.026300 2.929700 0.000000 900 2 6 A0A0A0 <>
35 7 1.201600 -1.635400 0.000000 900 2 6 A0A0A0 <>
36 2 0.332500 -4.626700 0.000000 900 2 6 A0A0A0 <>
37 7 1.706500 -0.973400 0.000000 900 2 6 A0A0A0 <>
38 6 1.154400 -4.599100 0.000000 900 2 6 A0A0A0 <>
39 6 2.821100 -1.802400 0.000000 900 2 6 A0A0A0 <>
40 2 -0.599200 3.288500 0.000000 900 2 6 A0A0A0 <>
41 3 1.898200 0.502100 0.000000 900 2 6 A0A0A0 1
42 2 0.748700 2.207500 0.000000 900 2 6 A0A0A0 <>
43 2 1.313200 1.603100 0.000000 900 2 6 A0A0A0 <>
44 4 -0.211500 0.550100 0.000000 900 2 6 A0A0A0 <>
45 7 -0.788900 2.560300 0.000000 900 2 6 A0A0A0 <>
46 2 0.336400 3.512400 0.000000 900 2 6 A0A0A0 <>
47 2 -0.186300 1.961300 0.000000 900 2 6 A0A0A0 <>
48 2 0.973400 2.896100 0.000000 900 2 6 A0A0A0 <>
49 2 1.189700 0.843500 0.000000 900 2 6 A0A0A0 <>
50 2 2.137700 1.726700 0.000000 900 2 6 A0A0A0 <>
51 4 -0.871000 0.190600 0.000000 900 2 6 A0A0A0 <>
52 5 0.510700 0.162800 0.000000 900 2 6 A0A0A0 <>
53 5 0.503900 -0.541800 0.000000 900 2 6 A0A0A0 <>
54 6 2.531100 -0.032300 0.000000 900 2 6 A0A0A0 <>
55 2 2.400600 2.496300 0.000000 900 2 6 A0A0A0 <>
56 2 1.856300 3.112600 0.000000 900 2 6 A0A0A0 <>
57 4 -0.153100 -0.927100 0.000000 900 2 6 A0A0A0 <>
58 6 -1.572200 0.603000 0.000000 900 2 6 A0A0A0 <>
59 6 3.214400 2.660400 0.000000 900 2 6 A0A0A0 <>
:::
}
m_bond[67] {
# First column is bond index #
i_m_from
i_m_to
i_m_order
i_sd_original_parity
:::
1 1 20 1 <>
2 2 23 1 <>
3 3 22 2 <>
4 4 26 1 <>
5 4 36 1 <>
6 5 31 1 <>
7 5 39 1 <>
8 6 34 2 <>
9 7 36 2 <>
10 8 37 1 <>
11 8 41 1 <>
12 9 41 1 <>
13 9 50 1 <>
14 10 51 1 <>
15 10 57 1 <>
16 11 46 2 <>
17 12 49 2 <>
18 13 56 1 <>
19 14 57 1 <>
20 15 34 1 <>
21 15 40 1 <>
22 16 44 1 <>
23 16 47 2 <>
24 17 18 1 <>
25 17 19 1 <>
26 17 20 1 <>
27 18 19 1 <>
28 18 22 1 <>
29 20 21 1 <>
30 21 23 1 <>
31 21 25 1 <>
32 22 27 1 <>
33 23 24 1 <>
34 24 26 1 <>
35 24 28 1 <>
36 26 29 1 <>
37 27 30 2 2
38 29 31 1 <>
39 29 32 1 <>
40 30 27 2 2
41 30 33 1 <>
42 30 34 1 <>
43 31 35 1 <>
44 35 37 2 2
45 36 38 1 <>
46 37 35 2 2
47 40 45 2 <>
48 40 46 1 <>
49 41 49 1 <>
50 41 54 1 1
51 42 43 2 <>
52 42 47 1 <>
53 42 48 1 <>
54 43 49 1 <>
55 43 50 1 <>
56 44 51 1 <>
57 44 52 1 <>
58 45 47 1 <>
59 46 48 1 <>
60 48 56 2 <>
61 50 55 2 <>
62 51 58 1 <>
63 52 53 1 <>
64 53 57 1 <>
65 54 41 1 1
66 55 56 1 <>
67 55 59 1 <>
:::
}
}
|