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"""Caching loader for the 20 newsgroups text classification dataset
The description of the dataset is available on the official website at:
http://people.csail.mit.edu/jrennie/20Newsgroups/
Quoting the introduction:
The 20 Newsgroups data set is a collection of approximately 20,000
newsgroup documents, partitioned (nearly) evenly across 20 different
newsgroups. To the best of my knowledge, it was originally collected
by Ken Lang, probably for his Newsweeder: Learning to filter netnews
paper, though he does not explicitly mention this collection. The 20
newsgroups collection has become a popular data set for experiments
in text applications of machine learning techniques, such as text
classification and text clustering.
This dataset loader will download the recommended "by date" variant of the
dataset and which features a point in time split between the train and
test sets. The compressed dataset size is around 14 Mb compressed. Once
uncompressed the train set is 52 MB and the test set is 34 MB.
The data is downloaded, extracted and cached in the '~/scikit_learn_data'
folder.
The `fetch_20newsgroups` function will not vectorize the data into numpy
arrays but the dataset lists the filenames of the posts and their categories
as target labels.
The `fetch_20newsgroups_tfidf` function will in addition do a simple tf-idf
vectorization step.
"""
# Copyright (c) 2011 Olivier Grisel <olivier.grisel@ensta.org>
# License: Simplified BSD
import os
import urllib
import logging
import tarfile
import pickle
import shutil
import numpy as np
import scipy.sparse as sp
from .base import get_data_home
from .base import Bunch
from .base import load_files
from ..utils import check_random_state, deprecated
from ..utils.fixes import in1d
from ..feature_extraction.text import CountVectorizer
from ..preprocessing import normalize
from ..externals import joblib
logger = logging.getLogger(__name__)
URL = ("http://people.csail.mit.edu/jrennie/"
"20Newsgroups/20news-bydate.tar.gz")
ARCHIVE_NAME = "20news-bydate.tar.gz"
CACHE_NAME = "20news-bydate.pkz"
TRAIN_FOLDER = "20news-bydate-train"
TEST_FOLDER = "20news-bydate-test"
def download_20newsgroups(target_dir, cache_path):
"""Download the 20 newsgroups data and stored it as a zipped pickle."""
archive_path = os.path.join(target_dir, ARCHIVE_NAME)
train_path = os.path.join(target_dir, TRAIN_FOLDER)
test_path = os.path.join(target_dir, TEST_FOLDER)
if not os.path.exists(target_dir):
os.makedirs(target_dir)
if not os.path.exists(archive_path):
logger.warn("Downloading dataset from %s (14 MB)", URL)
opener = urllib.urlopen(URL)
open(archive_path, 'wb').write(opener.read())
logger.info("Decompressing %s", archive_path)
tarfile.open(archive_path, "r:gz").extractall(path=target_dir)
os.remove(archive_path)
# Store a zipped pickle
cache = dict(
train=load_files(train_path, charset='latin1'),
test=load_files(test_path, charset='latin1')
)
open(cache_path, 'wb').write(pickle.dumps(cache).encode('zip'))
shutil.rmtree(target_dir)
return cache
def fetch_20newsgroups(data_home=None, subset='train', categories=None,
shuffle=True, random_state=42, download_if_missing=True):
"""Load the filenames of the 20 newsgroups dataset.
Parameters
----------
subset: 'train' or 'test', 'all', optional
Select the dataset to load: 'train' for the training set, 'test'
for the test set, 'all' for both, with shuffled ordering.
data_home: optional, default: None
Specify an download and cache folder for the datasets. If None,
all scikit-learn data is stored in '~/scikit_learn_data' subfolders.
categories: None or collection of string or unicode
If None (default), load all the categories.
If not None, list of category names to load (other categories
ignored).
shuffle: bool, optional
Whether or not to shuffle the data: might be important for models that
make the assumption that the samples are independent and identically
distributed (i.i.d.), such as stochastic gradient descent.
random_state: numpy random number generator or seed integer
Used to shuffle the dataset.
download_if_missing: optional, True by default
If False, raise an IOError if the data is not locally available
instead of trying to download the data from the source site.
"""
data_home = get_data_home(data_home=data_home)
cache_path = os.path.join(data_home, CACHE_NAME)
twenty_home = os.path.join(data_home, "20news_home")
cache = None
if os.path.exists(cache_path):
try:
cache = pickle.loads(open(cache_path, 'rb').read().decode('zip'))
except Exception as e:
print 80 * '_'
print 'Cache loading failed'
print 80 * '_'
print e
if cache is None:
if download_if_missing:
cache = download_20newsgroups(target_dir=twenty_home,
cache_path=cache_path)
else:
raise IOError('20Newsgroups dataset not found')
if subset in ('train', 'test'):
data = cache[subset]
elif subset == 'all':
data_lst = list()
target = list()
filenames = list()
for subset in ('train', 'test'):
data = cache[subset]
data_lst.extend(data.data)
target.extend(data.target)
filenames.extend(data.filenames)
data.data = data_lst
data.target = np.array(target)
data.filenames = np.array(filenames)
data.description = 'the 20 newsgroups by date dataset'
else:
raise ValueError(
"subset can only be 'train', 'test' or 'all', got '%s'" % subset)
if categories is not None:
labels = [(data.target_names.index(cat), cat) for cat in categories]
# Sort the categories to have the ordering of the labels
labels.sort()
labels, categories = zip(*labels)
mask = in1d(data.target, labels)
data.filenames = data.filenames[mask]
data.target = data.target[mask]
# searchsorted to have continuous labels
data.target = np.searchsorted(labels, data.target)
data.target_names = list(categories)
# Use an object array to shuffle: avoids memory copy
data_lst = np.array(data.data, dtype=object)
data_lst = data_lst[mask]
data.data = data_lst.tolist()
if shuffle:
random_state = check_random_state(random_state)
indices = np.arange(data.target.shape[0])
random_state.shuffle(indices)
data.filenames = data.filenames[indices]
data.target = data.target[indices]
# Use an object array to shuffle: avoids memory copy
data_lst = np.array(data.data, dtype=object)
data_lst = data_lst[indices]
data.data = data_lst.tolist()
return data
def fetch_20newsgroups_vectorized(subset="train", data_home=None):
"""Load the 20 newsgroups dataset and transform it into tf-idf vectors.
This is a convenience function; the tf-idf transformation is done using the
default settings for `sklearn.feature_extraction.text.Vectorizer`. For more
advanced usage (stopword filtering, n-gram extraction, etc.), combine
fetch_20newsgroups with a custom `Vectorizer` or `CountVectorizer`.
Parameters
----------
subset: 'train' or 'test', 'all', optional
Select the dataset to load: 'train' for the training set, 'test'
for the test set, 'all' for both, with shuffled ordering.
data_home: optional, default: None
Specify an download and cache folder for the datasets. If None,
all scikit-learn data is stored in '~/scikit_learn_data' subfolders.
Returns
-------
bunch : Bunch object
bunch.data: sparse matrix, shape [n_samples, n_features]
bunch.target: array, shape [n_samples]
bunch.target_names: list, length [n_classes]
"""
data_home = get_data_home(data_home=data_home)
target_file = os.path.join(data_home, "20newsgroup_vectorized.pk")
# we shuffle but use a fixed seed for the memoization
data_train = fetch_20newsgroups(data_home=data_home,
subset='train',
categories=None,
shuffle=True,
random_state=12)
data_test = fetch_20newsgroups(data_home=data_home,
subset='test',
categories=None,
shuffle=True,
random_state=12)
if os.path.exists(target_file):
X_train, X_test = joblib.load(target_file)
else:
vectorizer = CountVectorizer(dtype=np.int16)
X_train = vectorizer.fit_transform(data_train.data).tocsr()
X_test = vectorizer.transform(data_test.data).tocsr()
joblib.dump((X_train, X_test), target_file, compress=9)
# the data is stored as int16 for compactness
# but normalize needs floats
X_train = X_train.astype(np.float64)
X_test = X_test.astype(np.float64)
normalize(X_train, copy=False)
normalize(X_test, copy=False)
target_names = data_train.target_names
if subset == "train":
data = X_train
target = data_train.target
elif subset == "test":
data = X_test
target = data_test.target
elif subset == "all":
data = sp.vstack((X_train, X_test)).tocsr()
target = np.concatenate((data_train.target, data_test.target))
else:
raise ValueError("%r is not a valid subset: should be one of "
"['train', 'test', 'all']" % subset)
return Bunch(data=data, target=target, target_names=target_names)
@deprecated("Use fetch_20newsgroups instead with download_if_missing=False")
def load_20newsgroups(download_if_missing=False, **kwargs):
"""Alias for fetch_20newsgroups(download_if_missing=False).
See fetch_20newsgroups.__doc__ for documentation and parameter list.
"""
return fetch_20newsgroups(download_if_missing=download_if_missing,
**kwargs)
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