File: test_pipeline.py

package info (click to toggle)
scikit-learn 0.18-5
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 71,040 kB
  • ctags: 91,142
  • sloc: python: 97,257; ansic: 8,360; cpp: 5,649; makefile: 242; sh: 238
file content (729 lines) | stat: -rw-r--r-- 24,571 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
"""
Test the pipeline module.
"""
import numpy as np
from scipy import sparse

from sklearn.externals.six.moves import zip
from sklearn.utils.testing import assert_raises
from sklearn.utils.testing import assert_raises_regex
from sklearn.utils.testing import assert_raise_message
from sklearn.utils.testing import assert_equal
from sklearn.utils.testing import assert_false
from sklearn.utils.testing import assert_true
from sklearn.utils.testing import assert_array_equal
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import assert_warns_message
from sklearn.utils.testing import assert_dict_equal

from sklearn.base import clone, BaseEstimator
from sklearn.pipeline import Pipeline, FeatureUnion, make_pipeline, make_union
from sklearn.svm import SVC
from sklearn.linear_model import LogisticRegression
from sklearn.linear_model import LinearRegression
from sklearn.cluster import KMeans
from sklearn.feature_selection import SelectKBest, f_classif
from sklearn.decomposition import PCA, TruncatedSVD
from sklearn.datasets import load_iris
from sklearn.preprocessing import StandardScaler
from sklearn.feature_extraction.text import CountVectorizer


JUNK_FOOD_DOCS = (
    "the pizza pizza beer copyright",
    "the pizza burger beer copyright",
    "the the pizza beer beer copyright",
    "the burger beer beer copyright",
    "the coke burger coke copyright",
    "the coke burger burger",
)


class NoFit(object):
    """Small class to test parameter dispatching.
    """

    def __init__(self, a=None, b=None):
        self.a = a
        self.b = b


class NoTrans(NoFit):

    def fit(self, X, y):
        return self

    def get_params(self, deep=False):
        return {'a': self.a, 'b': self.b}

    def set_params(self, **params):
        self.a = params['a']
        return self


class NoInvTransf(NoTrans):
    def transform(self, X, y=None):
        return X


class Transf(NoInvTransf):
    def transform(self, X, y=None):
        return X

    def inverse_transform(self, X):
        return X


class Mult(BaseEstimator):
    def __init__(self, mult=1):
        self.mult = mult

    def fit(self, X, y):
        return self

    def transform(self, X):
        return np.asarray(X) * self.mult

    def inverse_transform(self, X):
        return np.asarray(X) / self.mult

    def predict(self, X):
        return (np.asarray(X) * self.mult).sum(axis=1)

    predict_proba = predict_log_proba = decision_function = predict

    def score(self, X, y=None):
        return np.sum(X)


class FitParamT(BaseEstimator):
    """Mock classifier
    """

    def __init__(self):
        self.successful = False

    def fit(self, X, y, should_succeed=False):
        self.successful = should_succeed

    def predict(self, X):
        return self.successful


def test_pipeline_init():
    # Test the various init parameters of the pipeline.
    assert_raises(TypeError, Pipeline)
    # Check that we can't instantiate pipelines with objects without fit
    # method
    assert_raises_regex(TypeError,
                        'Last step of Pipeline should implement fit. '
                        '.*NoFit.*',
                        Pipeline, [('clf', NoFit())])
    # Smoke test with only an estimator
    clf = NoTrans()
    pipe = Pipeline([('svc', clf)])
    assert_equal(pipe.get_params(deep=True),
                 dict(svc__a=None, svc__b=None, svc=clf,
                      **pipe.get_params(deep=False)))

    # Check that params are set
    pipe.set_params(svc__a=0.1)
    assert_equal(clf.a, 0.1)
    assert_equal(clf.b, None)
    # Smoke test the repr:
    repr(pipe)

    # Test with two objects
    clf = SVC()
    filter1 = SelectKBest(f_classif)
    pipe = Pipeline([('anova', filter1), ('svc', clf)])

    # Check that we can't instantiate with non-transformers on the way
    # Note that NoTrans implements fit, but not transform
    assert_raises_regex(TypeError,
                        'All intermediate steps should be transformers'
                        '.*\\bNoTrans\\b.*',
                        Pipeline, [('t', NoTrans()), ('svc', clf)])

    # Check that params are set
    pipe.set_params(svc__C=0.1)
    assert_equal(clf.C, 0.1)
    # Smoke test the repr:
    repr(pipe)

    # Check that params are not set when naming them wrong
    assert_raises(ValueError, pipe.set_params, anova__C=0.1)

    # Test clone
    pipe2 = clone(pipe)
    assert_false(pipe.named_steps['svc'] is pipe2.named_steps['svc'])

    # Check that apart from estimators, the parameters are the same
    params = pipe.get_params(deep=True)
    params2 = pipe2.get_params(deep=True)

    for x in pipe.get_params(deep=False):
        params.pop(x)

    for x in pipe2.get_params(deep=False):
        params2.pop(x)

    # Remove estimators that where copied
    params.pop('svc')
    params.pop('anova')
    params2.pop('svc')
    params2.pop('anova')
    assert_equal(params, params2)


def test_pipeline_methods_anova():
    # Test the various methods of the pipeline (anova).
    iris = load_iris()
    X = iris.data
    y = iris.target
    # Test with Anova + LogisticRegression
    clf = LogisticRegression()
    filter1 = SelectKBest(f_classif, k=2)
    pipe = Pipeline([('anova', filter1), ('logistic', clf)])
    pipe.fit(X, y)
    pipe.predict(X)
    pipe.predict_proba(X)
    pipe.predict_log_proba(X)
    pipe.score(X, y)


def test_pipeline_fit_params():
    # Test that the pipeline can take fit parameters
    pipe = Pipeline([('transf', Transf()), ('clf', FitParamT())])
    pipe.fit(X=None, y=None, clf__should_succeed=True)
    # classifier should return True
    assert_true(pipe.predict(None))
    # and transformer params should not be changed
    assert_true(pipe.named_steps['transf'].a is None)
    assert_true(pipe.named_steps['transf'].b is None)


def test_pipeline_raise_set_params_error():
    # Test pipeline raises set params error message for nested models.
    pipe = Pipeline([('cls', LinearRegression())])

    # expected error message
    error_msg = ('Invalid parameter %s for estimator %s. '
                 'Check the list of available parameters '
                 'with `estimator.get_params().keys()`.')

    assert_raise_message(ValueError,
                         error_msg % ('fake', 'Pipeline'),
                         pipe.set_params,
                         fake='nope')

    # nested model check
    assert_raise_message(ValueError,
                         error_msg % ("fake", pipe),
                         pipe.set_params,
                         fake__estimator='nope')


def test_pipeline_methods_pca_svm():
    # Test the various methods of the pipeline (pca + svm).
    iris = load_iris()
    X = iris.data
    y = iris.target
    # Test with PCA + SVC
    clf = SVC(probability=True, random_state=0)
    pca = PCA(svd_solver='full', n_components='mle', whiten=True)
    pipe = Pipeline([('pca', pca), ('svc', clf)])
    pipe.fit(X, y)
    pipe.predict(X)
    pipe.predict_proba(X)
    pipe.predict_log_proba(X)
    pipe.score(X, y)


def test_pipeline_methods_preprocessing_svm():
    # Test the various methods of the pipeline (preprocessing + svm).
    iris = load_iris()
    X = iris.data
    y = iris.target
    n_samples = X.shape[0]
    n_classes = len(np.unique(y))
    scaler = StandardScaler()
    pca = PCA(n_components=2, svd_solver='randomized', whiten=True)
    clf = SVC(probability=True, random_state=0, decision_function_shape='ovr')

    for preprocessing in [scaler, pca]:
        pipe = Pipeline([('preprocess', preprocessing), ('svc', clf)])
        pipe.fit(X, y)

        # check shapes of various prediction functions
        predict = pipe.predict(X)
        assert_equal(predict.shape, (n_samples,))

        proba = pipe.predict_proba(X)
        assert_equal(proba.shape, (n_samples, n_classes))

        log_proba = pipe.predict_log_proba(X)
        assert_equal(log_proba.shape, (n_samples, n_classes))

        decision_function = pipe.decision_function(X)
        assert_equal(decision_function.shape, (n_samples, n_classes))

        pipe.score(X, y)


def test_fit_predict_on_pipeline():
    # test that the fit_predict method is implemented on a pipeline
    # test that the fit_predict on pipeline yields same results as applying
    # transform and clustering steps separately
    iris = load_iris()
    scaler = StandardScaler()
    km = KMeans(random_state=0)

    # first compute the transform and clustering step separately
    scaled = scaler.fit_transform(iris.data)
    separate_pred = km.fit_predict(scaled)

    # use a pipeline to do the transform and clustering in one step
    pipe = Pipeline([('scaler', scaler), ('Kmeans', km)])
    pipeline_pred = pipe.fit_predict(iris.data)

    assert_array_almost_equal(pipeline_pred, separate_pred)


def test_fit_predict_on_pipeline_without_fit_predict():
    # tests that a pipeline does not have fit_predict method when final
    # step of pipeline does not have fit_predict defined
    scaler = StandardScaler()
    pca = PCA(svd_solver='full')
    pipe = Pipeline([('scaler', scaler), ('pca', pca)])
    assert_raises_regex(AttributeError,
                        "'PCA' object has no attribute 'fit_predict'",
                        getattr, pipe, 'fit_predict')


def test_feature_union():
    # basic sanity check for feature union
    iris = load_iris()
    X = iris.data
    X -= X.mean(axis=0)
    y = iris.target
    svd = TruncatedSVD(n_components=2, random_state=0)
    select = SelectKBest(k=1)
    fs = FeatureUnion([("svd", svd), ("select", select)])
    fs.fit(X, y)
    X_transformed = fs.transform(X)
    assert_equal(X_transformed.shape, (X.shape[0], 3))

    # check if it does the expected thing
    assert_array_almost_equal(X_transformed[:, :-1], svd.fit_transform(X))
    assert_array_equal(X_transformed[:, -1],
                       select.fit_transform(X, y).ravel())

    # test if it also works for sparse input
    # We use a different svd object to control the random_state stream
    fs = FeatureUnion([("svd", svd), ("select", select)])
    X_sp = sparse.csr_matrix(X)
    X_sp_transformed = fs.fit_transform(X_sp, y)
    assert_array_almost_equal(X_transformed, X_sp_transformed.toarray())

    # test setting parameters
    fs.set_params(select__k=2)
    assert_equal(fs.fit_transform(X, y).shape, (X.shape[0], 4))

    # test it works with transformers missing fit_transform
    fs = FeatureUnion([("mock", Transf()), ("svd", svd), ("select", select)])
    X_transformed = fs.fit_transform(X, y)
    assert_equal(X_transformed.shape, (X.shape[0], 8))

    # test error if some elements do not support transform
    assert_raises_regex(TypeError,
                        'All estimators should implement fit and '
                        'transform.*\\bNoTrans\\b',
                        FeatureUnion,
                        [("transform", Transf()), ("no_transform", NoTrans())])


def test_make_union():
    pca = PCA(svd_solver='full')
    mock = Transf()
    fu = make_union(pca, mock)
    names, transformers = zip(*fu.transformer_list)
    assert_equal(names, ("pca", "transf"))
    assert_equal(transformers, (pca, mock))


def test_pipeline_transform():
    # Test whether pipeline works with a transformer at the end.
    # Also test pipeline.transform and pipeline.inverse_transform
    iris = load_iris()
    X = iris.data
    pca = PCA(n_components=2, svd_solver='full')
    pipeline = Pipeline([('pca', pca)])

    # test transform and fit_transform:
    X_trans = pipeline.fit(X).transform(X)
    X_trans2 = pipeline.fit_transform(X)
    X_trans3 = pca.fit_transform(X)
    assert_array_almost_equal(X_trans, X_trans2)
    assert_array_almost_equal(X_trans, X_trans3)

    X_back = pipeline.inverse_transform(X_trans)
    X_back2 = pca.inverse_transform(X_trans)
    assert_array_almost_equal(X_back, X_back2)


def test_pipeline_fit_transform():
    # Test whether pipeline works with a transformer missing fit_transform
    iris = load_iris()
    X = iris.data
    y = iris.target
    transf = Transf()
    pipeline = Pipeline([('mock', transf)])

    # test fit_transform:
    X_trans = pipeline.fit_transform(X, y)
    X_trans2 = transf.fit(X, y).transform(X)
    assert_array_almost_equal(X_trans, X_trans2)


def test_set_pipeline_steps():
    transf1 = Transf()
    transf2 = Transf()
    pipeline = Pipeline([('mock', transf1)])
    assert_true(pipeline.named_steps['mock'] is transf1)

    # Directly setting attr
    pipeline.steps = [('mock2', transf2)]
    assert_true('mock' not in pipeline.named_steps)
    assert_true(pipeline.named_steps['mock2'] is transf2)
    assert_equal([('mock2', transf2)], pipeline.steps)

    # Using set_params
    pipeline.set_params(steps=[('mock', transf1)])
    assert_equal([('mock', transf1)], pipeline.steps)

    # Using set_params to replace single step
    pipeline.set_params(mock=transf2)
    assert_equal([('mock', transf2)], pipeline.steps)

    # With invalid data
    pipeline.set_params(steps=[('junk', ())])
    assert_raises(TypeError, pipeline.fit, [[1]], [1])
    assert_raises(TypeError, pipeline.fit_transform, [[1]], [1])


def test_set_pipeline_step_none():
    # Test setting Pipeline steps to None
    X = np.array([[1]])
    y = np.array([1])
    mult2 = Mult(mult=2)
    mult3 = Mult(mult=3)
    mult5 = Mult(mult=5)

    def make():
        return Pipeline([('m2', mult2), ('m3', mult3), ('last', mult5)])

    pipeline = make()

    exp = 2 * 3 * 5
    assert_array_equal([[exp]], pipeline.fit_transform(X, y))
    assert_array_equal([exp], pipeline.fit(X).predict(X))
    assert_array_equal(X, pipeline.inverse_transform([[exp]]))

    pipeline.set_params(m3=None)
    exp = 2 * 5
    assert_array_equal([[exp]], pipeline.fit_transform(X, y))
    assert_array_equal([exp], pipeline.fit(X).predict(X))
    assert_array_equal(X, pipeline.inverse_transform([[exp]]))
    assert_dict_equal(pipeline.get_params(deep=True),
                      {'steps': pipeline.steps,
                       'm2': mult2,
                       'm3': None,
                       'last': mult5,
                       'm2__mult': 2,
                       'last__mult': 5,
                       })

    pipeline.set_params(m2=None)
    exp = 5
    assert_array_equal([[exp]], pipeline.fit_transform(X, y))
    assert_array_equal([exp], pipeline.fit(X).predict(X))
    assert_array_equal(X, pipeline.inverse_transform([[exp]]))

    # for other methods, ensure no AttributeErrors on None:
    other_methods = ['predict_proba', 'predict_log_proba',
                     'decision_function', 'transform', 'score']
    for method in other_methods:
        getattr(pipeline, method)(X)

    pipeline.set_params(m2=mult2)
    exp = 2 * 5
    assert_array_equal([[exp]], pipeline.fit_transform(X, y))
    assert_array_equal([exp], pipeline.fit(X).predict(X))
    assert_array_equal(X, pipeline.inverse_transform([[exp]]))

    pipeline = make()
    pipeline.set_params(last=None)
    # mult2 and mult3 are active
    exp = 6
    assert_array_equal([[exp]], pipeline.fit(X, y).transform(X))
    assert_array_equal([[exp]], pipeline.fit_transform(X, y))
    assert_array_equal(X, pipeline.inverse_transform([[exp]]))
    assert_raise_message(AttributeError,
                         "'NoneType' object has no attribute 'predict'",
                         getattr, pipeline, 'predict')

    # Check None step at construction time
    exp = 2 * 5
    pipeline = Pipeline([('m2', mult2), ('m3', None), ('last', mult5)])
    assert_array_equal([[exp]], pipeline.fit_transform(X, y))
    assert_array_equal([exp], pipeline.fit(X).predict(X))
    assert_array_equal(X, pipeline.inverse_transform([[exp]]))


def test_pipeline_ducktyping():
    pipeline = make_pipeline(Mult(5))
    pipeline.predict
    pipeline.transform
    pipeline.inverse_transform

    pipeline = make_pipeline(Transf())
    assert_false(hasattr(pipeline, 'predict'))
    pipeline.transform
    pipeline.inverse_transform

    pipeline = make_pipeline(None)
    assert_false(hasattr(pipeline, 'predict'))
    pipeline.transform
    pipeline.inverse_transform

    pipeline = make_pipeline(Transf(), NoInvTransf())
    assert_false(hasattr(pipeline, 'predict'))
    pipeline.transform
    assert_false(hasattr(pipeline, 'inverse_transform'))

    pipeline = make_pipeline(NoInvTransf(), Transf())
    assert_false(hasattr(pipeline, 'predict'))
    pipeline.transform
    assert_false(hasattr(pipeline, 'inverse_transform'))


def test_make_pipeline():
    t1 = Transf()
    t2 = Transf()
    pipe = make_pipeline(t1, t2)
    assert_true(isinstance(pipe, Pipeline))
    assert_equal(pipe.steps[0][0], "transf-1")
    assert_equal(pipe.steps[1][0], "transf-2")

    pipe = make_pipeline(t1, t2, FitParamT())
    assert_true(isinstance(pipe, Pipeline))
    assert_equal(pipe.steps[0][0], "transf-1")
    assert_equal(pipe.steps[1][0], "transf-2")
    assert_equal(pipe.steps[2][0], "fitparamt")


def test_feature_union_weights():
    # test feature union with transformer weights
    iris = load_iris()
    X = iris.data
    y = iris.target
    pca = PCA(n_components=2, svd_solver='randomized', random_state=0)
    select = SelectKBest(k=1)
    # test using fit followed by transform
    fs = FeatureUnion([("pca", pca), ("select", select)],
                      transformer_weights={"pca": 10})
    fs.fit(X, y)
    X_transformed = fs.transform(X)
    # test using fit_transform
    fs = FeatureUnion([("pca", pca), ("select", select)],
                      transformer_weights={"pca": 10})
    X_fit_transformed = fs.fit_transform(X, y)
    # test it works with transformers missing fit_transform
    fs = FeatureUnion([("mock", Transf()), ("pca", pca), ("select", select)],
                      transformer_weights={"mock": 10})
    X_fit_transformed_wo_method = fs.fit_transform(X, y)
    # check against expected result

    # We use a different pca object to control the random_state stream
    assert_array_almost_equal(X_transformed[:, :-1], 10 * pca.fit_transform(X))
    assert_array_equal(X_transformed[:, -1],
                       select.fit_transform(X, y).ravel())
    assert_array_almost_equal(X_fit_transformed[:, :-1],
                              10 * pca.fit_transform(X))
    assert_array_equal(X_fit_transformed[:, -1],
                       select.fit_transform(X, y).ravel())
    assert_equal(X_fit_transformed_wo_method.shape, (X.shape[0], 7))


def test_feature_union_parallel():
    # test that n_jobs work for FeatureUnion
    X = JUNK_FOOD_DOCS

    fs = FeatureUnion([
        ("words", CountVectorizer(analyzer='word')),
        ("chars", CountVectorizer(analyzer='char')),
    ])

    fs_parallel = FeatureUnion([
        ("words", CountVectorizer(analyzer='word')),
        ("chars", CountVectorizer(analyzer='char')),
    ], n_jobs=2)

    fs_parallel2 = FeatureUnion([
        ("words", CountVectorizer(analyzer='word')),
        ("chars", CountVectorizer(analyzer='char')),
    ], n_jobs=2)

    fs.fit(X)
    X_transformed = fs.transform(X)
    assert_equal(X_transformed.shape[0], len(X))

    fs_parallel.fit(X)
    X_transformed_parallel = fs_parallel.transform(X)
    assert_equal(X_transformed.shape, X_transformed_parallel.shape)
    assert_array_equal(
        X_transformed.toarray(),
        X_transformed_parallel.toarray()
    )

    # fit_transform should behave the same
    X_transformed_parallel2 = fs_parallel2.fit_transform(X)
    assert_array_equal(
        X_transformed.toarray(),
        X_transformed_parallel2.toarray()
    )

    # transformers should stay fit after fit_transform
    X_transformed_parallel2 = fs_parallel2.transform(X)
    assert_array_equal(
        X_transformed.toarray(),
        X_transformed_parallel2.toarray()
    )


def test_feature_union_feature_names():
    word_vect = CountVectorizer(analyzer="word")
    char_vect = CountVectorizer(analyzer="char_wb", ngram_range=(3, 3))
    ft = FeatureUnion([("chars", char_vect), ("words", word_vect)])
    ft.fit(JUNK_FOOD_DOCS)
    feature_names = ft.get_feature_names()
    for feat in feature_names:
        assert_true("chars__" in feat or "words__" in feat)
    assert_equal(len(feature_names), 35)

    ft = FeatureUnion([("tr1", Transf())]).fit([[1]])
    assert_raise_message(AttributeError,
                         'Transformer tr1 (type Transf) does not provide '
                         'get_feature_names', ft.get_feature_names)


def test_classes_property():
    iris = load_iris()
    X = iris.data
    y = iris.target

    reg = make_pipeline(SelectKBest(k=1), LinearRegression())
    reg.fit(X, y)
    assert_raises(AttributeError, getattr, reg, "classes_")

    clf = make_pipeline(SelectKBest(k=1), LogisticRegression(random_state=0))
    assert_raises(AttributeError, getattr, clf, "classes_")
    clf.fit(X, y)
    assert_array_equal(clf.classes_, np.unique(y))


def test_X1d_inverse_transform():
    transformer = Transf()
    pipeline = make_pipeline(transformer)
    X = np.ones(10)
    msg = "1d X will not be reshaped in pipeline.inverse_transform"
    assert_warns_message(FutureWarning, msg, pipeline.inverse_transform, X)


def test_set_feature_union_steps():
    mult2 = Mult(2)
    mult2.get_feature_names = lambda: ['x2']
    mult3 = Mult(3)
    mult3.get_feature_names = lambda: ['x3']
    mult5 = Mult(5)
    mult5.get_feature_names = lambda: ['x5']

    ft = FeatureUnion([('m2', mult2), ('m3', mult3)])
    assert_array_equal([[2, 3]], ft.transform(np.asarray([[1]])))
    assert_equal(['m2__x2', 'm3__x3'], ft.get_feature_names())

    # Directly setting attr
    ft.transformer_list = [('m5', mult5)]
    assert_array_equal([[5]], ft.transform(np.asarray([[1]])))
    assert_equal(['m5__x5'], ft.get_feature_names())

    # Using set_params
    ft.set_params(transformer_list=[('mock', mult3)])
    assert_array_equal([[3]], ft.transform(np.asarray([[1]])))
    assert_equal(['mock__x3'], ft.get_feature_names())

    # Using set_params to replace single step
    ft.set_params(mock=mult5)
    assert_array_equal([[5]], ft.transform(np.asarray([[1]])))
    assert_equal(['mock__x5'], ft.get_feature_names())


def test_set_feature_union_step_none():
    mult2 = Mult(2)
    mult2.get_feature_names = lambda: ['x2']
    mult3 = Mult(3)
    mult3.get_feature_names = lambda: ['x3']
    X = np.asarray([[1]])

    ft = FeatureUnion([('m2', mult2), ('m3', mult3)])
    assert_array_equal([[2, 3]], ft.fit(X).transform(X))
    assert_array_equal([[2, 3]], ft.fit_transform(X))
    assert_equal(['m2__x2', 'm3__x3'], ft.get_feature_names())

    ft.set_params(m2=None)
    assert_array_equal([[3]], ft.fit(X).transform(X))
    assert_array_equal([[3]], ft.fit_transform(X))
    assert_equal(['m3__x3'], ft.get_feature_names())

    ft.set_params(m3=None)
    assert_array_equal([[]], ft.fit(X).transform(X))
    assert_array_equal([[]], ft.fit_transform(X))
    assert_equal([], ft.get_feature_names())

    # check we can change back
    ft.set_params(m3=mult3)
    assert_array_equal([[3]], ft.fit(X).transform(X))


def test_step_name_validation():
    bad_steps1 = [('a__q', Mult(2)), ('b', Mult(3))]
    bad_steps2 = [('a', Mult(2)), ('a', Mult(3))]
    for cls, param in [(Pipeline, 'steps'),
                       (FeatureUnion, 'transformer_list')]:
        # we validate in construction (despite scikit-learn convention)
        bad_steps3 = [('a', Mult(2)), (param, Mult(3))]
        for bad_steps, message in [
            (bad_steps1, "Step names must not contain __: got ['a__q']"),
            (bad_steps2, "Names provided are not unique: ['a', 'a']"),
            (bad_steps3, "Step names conflict with constructor "
                         "arguments: ['%s']" % param),
        ]:
            # three ways to make invalid:
            # - construction
            assert_raise_message(ValueError, message, cls,
                                 **{param: bad_steps})

            # - setattr
            est = cls(**{param: [('a', Mult(1))]})
            setattr(est, param, bad_steps)
            assert_raise_message(ValueError, message, est.fit, [[1]], [1])
            assert_raise_message(ValueError, message, est.fit_transform,
                                 [[1]], [1])

            # - set_params
            est = cls(**{param: [('a', Mult(1))]})
            est.set_params(**{param: bad_steps})
            assert_raise_message(ValueError, message, est.fit, [[1]], [1])
            assert_raise_message(ValueError, message, est.fit_transform,
                                 [[1]], [1])