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Source: scoary
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Afif Elghraoui <afif@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>=9),
dh-python,
python-all,
python-setuptools,
python-scipy (>= 0.16),
# Test-Depends:
python-nose
Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/med-team/scoary
Vcs-Git: https://salsa.debian.org/med-team/scoary.git
Homepage: https://github.com/AdmiralenOla/Scoary
Package: scoary
Architecture: all
Depends: ${misc:Depends},
${python:Depends},
python-pkg-resources
Suggests: roary
Description: pangenome-wide association studies
Scoary is designed to take the gene_presence_absence.csv file from
Roary as well as a traits file created by the user and calculate the
associations between all genes in the accessory genome and the traits. It
reports a list of genes sorted by strength of association per trait.
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