File: control

package info (click to toggle)
scoary 1.6.16-2
  • links: PTS, VCS
  • area: main
  • in suites: bullseye, sid
  • size: 3,932 kB
  • sloc: python: 2,824; sh: 24; makefile: 7
file content (28 lines) | stat: -rw-r--r-- 1,062 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
Source: scoary
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 12),
               dh-python,
               python3-all,
               python3-setuptools,
               python3-scipy (>= 0.16),
               python3-nose <!nocheck>
Standards-Version: 4.4.0
Vcs-Browser: https://salsa.debian.org/med-team/scoary
Vcs-Git: https://salsa.debian.org/med-team/scoary.git
Homepage: https://github.com/AdmiralenOla/Scoary

Package: scoary
Architecture: all
Depends: ${misc:Depends},
         ${python3:Depends},
         python3-pkg-resources,
         python3-scipy
Suggests: roary
Description: pangenome-wide association studies
 Scoary is designed to take the gene_presence_absence.csv file from
 Roary as well as a traits file created by the user and calculate the
 associations between all genes in the accessory genome and the traits. It
 reports a list of genes sorted by strength of association per trait.