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Source: scoary
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
Étienne Mollier <emollier@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-python,
python3-all,
python3-setuptools,
python3-scipy,
python3-ete3 <!nocheck>,
python3-six <!nocheck>
Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/med-team/scoary
Vcs-Git: https://salsa.debian.org/med-team/scoary.git
Homepage: https://github.com/AdmiralenOla/Scoary
Rules-Requires-Root: no
Package: scoary
Architecture: all
Depends: ${misc:Depends},
${python3:Depends},
python3-pkg-resources,
python3-scipy
Suggests: roary
Description: pangenome-wide association studies
Scoary is designed to take the gene_presence_absence.csv file from
Roary as well as a traits file created by the user and calculate the
associations between all genes in the accessory genome and the traits. It
reports a list of genes sorted by strength of association per trait.
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