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Source: scrappie
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Build-Depends: debhelper-compat (= 13),
libcunit1-dev,
libhdf5-dev,
libopenblas-dev,
cmake,
libsimde-dev
Standards-Version: 4.7.2
Homepage: https://github.com/nanoporetech/scrappie
Vcs-Browser: https://salsa.debian.org/med-team/scrappie
Vcs-Git: https://salsa.debian.org/med-team/scrappie.git
Rules-Requires-Root: no
Package: scrappie
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
# Since this package has a MPL-2.0 license, adding Built-Using field
Built-Using: ${simde:Built-Using}
Description: basecaller for Nanopore sequencer
The Nanopore is a device for DNA/RNA sequencing that does
not require an amplification of the material. The polynucleotides
are threaded through a pore and while these pass through,
the change in the electrostatic potential allows one to
identify ("call") the actual base that resides in the pore.
Scrappie goes a step further and also attempts to describe
modifications to the nucleic acid.
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