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#!/usr/bin/make -f
# Uncomment this to turn on verbose mode.
export DH_VERBOSE=1
# Droping -fstack-protector flag helps **drastically** reducing memory consumption when building the package!!!!
# export CXXFLAGS:=$(shell dpkg-buildflags --get CXXFLAGS | sed 's/-fstack-protector *//') ## this simply tiggers #759978
export DEB_BUILD_MAINT_OPTIONS = hardening=-stackprotector
# alternatively: export DEB_CXXFLAGS_STRIP='-fstack-protector'
DEB_HOST_ARCH ?= $(shell dpkg-architecture -qDEB_HOST_ARCH)
DEB_BUILD_ARCH ?= $(shell dpkg-architecture -qDEB_BUILD_ARCH)
ifneq (,$(filter $(DEB_BUILD_ARCH),mips mipsel))
export CXXFLAGS:=$(shell dpkg-buildflags --get CXXFLAGS | sed 's/-O[1-9]//') -O0 -mxgot
endif
%:
dh $@
override_dh_auto_build:
dh_auto_build
cd obj-$(DEB_BUILD_GNU_TYPE); make docs
override_dh_install:
dh_install
# /usr/bin/join is part of coreutils package: Avoid name conflict by renaming it to seqan-join
# This solution is withdrawn in favour of just providing a set of binaries according to upstream
# in /usr/bin (via symlink) while others go to /usr/lib/seqan/bin (see README.Debian)
# mv $(CURDIR)/debian/seqan-apps/usr/bin/join $(CURDIR)/debian/seqan-apps/usr/bin/seqan-join
#
# Formerly binaries were installed into usr/lib/seqan/bin/
# and only some of them were made available in /usr/bin via dh_link
# Since there is no obvious reason for this neither is there any
# documentation that explains the motivation this is commented here.
#for APP in `find $(CURDIR)/obj*/apps -mindepth 1 -maxdepth 1 -executable -type f` ; do \
# cp -a $$APP $(CURDIR)/debian/seqan-apps/usr/lib/seqan/bin/ ; done
# ------------------------------------------------------------------
# Formerly readmes were named README.app. It seems more consistent
# to keep upstream documentation layout which in addition contains
# some example files. So the old code is commented here.
#for APP in `find apps -name README` ; do \
# app=`echo $$APP | sed 's?.*apps/\(.\+\)/README?\1?'` ; \
# echo $$app ; \
# cp -a $$APP $(CURDIR)/debian/seqan-apps/usr/share/doc/seqan-apps/README.$$app ; \
#done
# ------------------------------------------------------------------
# Delete additional LICENSE files
find $(CURDIR)/debian/seqan-apps -type f -name LICENSE -delete
if [ -d $(CURDIR)/debian/seqan-dev ] ; then \
find $(CURDIR)/debian/seqan-dev -type f -name LICENSE -delete ; \
# Delete *.pyc files that somehow end up in seqan-dev documentation \
find $(CURDIR)/debian/seqan-dev -type f -name "*.pyc" -delete ; \
fi
override_dh_auto_clean:
dh_auto_clean
find . -type f -name "*.pyc" -delete
if [ -d orig ] ; then \
for header in `find orig -name "*generated_forwards.h"` ; do \
mv $${header} `echo $$header | sed 's?orig/??'` ; \
done ; \
fi
rm -rf orig
override_dh_link:
dh_link
# we generate only those manpages where binaries are linked to /usr/bin
# since dh_link is executed after dh_installmanpages this is done here
$(CURDIR)/debian/generate_manpages
override_dh_auto_test:
# Run test suite only on powerfull architectures (amd64) at build time
ifneq (,$(filter $(DEB_HOST_ARCH),amd64 kfreebsd-amd64))
dh_auto_test
else
echo "Do not run test suite when building on architecture $(DEB_HOST_ARCH)"
endif
get-orig-source:
uscan --verbose --force-download --repack --compress xz
|
