File: assignment_3.cpp

package info (click to toggle)
seqan2 2.3.1%2Bdfsg-4
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 222,320 kB
  • ctags: 40,872
  • sloc: cpp: 252,894; ansic: 86,805; python: 6,534; sh: 985; xml: 570; makefile: 236; awk: 51
file content (19 lines) | stat: -rw-r--r-- 474 bytes parent folder | download | duplicates (7)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
#include <seqan/stream.h>
#include <seqan/sequence.h>
#include <seqan/file.h>

using namespace seqan;

int main()
{
    String<Dna5> nucleotides = "AGTCGTGNNANCT";
    String<Dna5> selected;
    // Append all elements of nucleotides, apart of Gs,
    // to the list selected.
    for (unsigned i = 0; i < length(nucleotides); ++i)
    {
        appendValue(selected, nucleotides[i]);
    }
    std::cout << "Selected nucleotides: " << selected << std::endl;
    return 0;
}