File: find_index_multiple.cpp

package info (click to toggle)
seqan2 2.4.0%2Bdfsg-16
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 224,180 kB
  • sloc: cpp: 256,886; ansic: 91,672; python: 8,330; sh: 995; xml: 570; makefile: 252; awk: 51; javascript: 21
file content (28 lines) | stat: -rw-r--r-- 668 bytes parent folder | download | duplicates (7)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
//![includes]
#include <iostream>
#include <seqan/index.h>

using namespace seqan;
//![includes]

//![initialization]
int main()
{
    typedef StringSet<CharString> THaystacks;
    THaystacks haystacks;
    appendValue(haystacks, "tobeornottobe");
    appendValue(haystacks, "thebeeonthecomb");
    appendValue(haystacks, "beingjohnmalkovich");

    Index<THaystacks> index(haystacks);
    Finder<Index<THaystacks> > finder(haystacks);
//![initialization]

//![output]
    clear(finder);
    while (find(finder, "be"))
        std::cout << '[' << beginPosition(finder) << ',' << endPosition(finder) << ")\t" << infix(finder) << std::endl;

    return 0;
}
//![output]