1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
|
// ==========================================================================
// arg_parse
// ==========================================================================
// Copyright (c) 2006-2018, Knut Reinert, FU Berlin
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
// * Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
// * Neither the name of Knut Reinert or the FU Berlin nor the names of
// its contributors may be used to endorse or promote products derived
// from this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL KNUT REINERT OR THE FU BERLIN BE LIABLE
// FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
// DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
// SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
// CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
// LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
// OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
// DAMAGE.
//
// ==========================================================================
// Author: Stephan Aiche <stephan.aiche@fu-berlin.de>
// ==========================================================================
#define SEQAN_DEBUG
#include <seqan/basic.h>
#include <seqan/stream.h>
#include "test_arg_parse.h"
#include "test_arg_parse_argument.h"
#include "test_arg_parse_option.h"
#include "test_argument_parser.h"
#include "test_arg_parse_ctd_support.h"
using namespace seqan;
SEQAN_BEGIN_TESTSUITE(test_arg_parse)
{
// Test an unset value
SEQAN_CALL_TEST(test_unset_value);
SEQAN_CALL_TEST(test_unset_values);
// Call the int option tests
SEQAN_CALL_TEST(test_int_short_argument);
SEQAN_CALL_TEST(test_int_long_argument);
SEQAN_CALL_TEST(test_non_int_argument);
// Call the int64 option tests
SEQAN_CALL_TEST(test_int64_short_argument);
SEQAN_CALL_TEST(test_int64_long_argument);
SEQAN_CALL_TEST(test_non_int64_argument);
// Call the double option tests
SEQAN_CALL_TEST(test_double_short_argument);
SEQAN_CALL_TEST(test_double_long_argument);
SEQAN_CALL_TEST(test_non_double_argument);
SEQAN_CALL_TEST(test_double_scientific_notation);
// Call the string option tests
SEQAN_CALL_TEST(test_string_short_argument);
SEQAN_CALL_TEST(test_string_long_argument);
// Test missing argument with string option
SEQAN_CALL_TEST(test_string_missing_argument);
// Test list of arguments
SEQAN_CALL_TEST(test_string_list);
// Test min/max restrictions
SEQAN_CALL_TEST(test_min_max_double_values_in_range);
SEQAN_CALL_TEST(test_min_max_double_values_to_small);
SEQAN_CALL_TEST(test_min_max_double_values_to_big);
SEQAN_CALL_TEST(test_min_max_int_values_in_range);
SEQAN_CALL_TEST(test_min_max_int_values_to_small);
SEQAN_CALL_TEST(test_min_max_int_values_to_big);
// Test allowed values.
SEQAN_CALL_TEST(test_allowed_values_contained);
SEQAN_CALL_TEST(test_allowed_values_not_contained);
// Test file types
SEQAN_CALL_TEST(test_input_file_short);
SEQAN_CALL_TEST(test_input_file_long);
SEQAN_CALL_TEST(test_input_file_missing);
SEQAN_CALL_TEST(test_input_file_invalid_type);
SEQAN_CALL_TEST(test_input_file_valid_type);
SEQAN_CALL_TEST(test_input_file_extension);
SEQAN_CALL_TEST(test_input_file_auto_file_ext_option); // automatic --${name}-file-ext option.
SEQAN_CALL_TEST(test_output_file_short);
SEQAN_CALL_TEST(test_output_file_long);
SEQAN_CALL_TEST(test_output_file_missing);
SEQAN_CALL_TEST(test_output_file_invalid_type);
SEQAN_CALL_TEST(test_output_file_valid_type);
SEQAN_CALL_TEST(test_output_file_extension);
SEQAN_CALL_TEST(test_output_file_extension_targz);
SEQAN_CALL_TEST(test_output_file_explicit_extension_valid);
SEQAN_CALL_TEST(test_output_file_explicit_extension_invalid);
// Test for arguments.
SEQAN_CALL_TEST(test_argument_string);
SEQAN_CALL_TEST(test_argument_not_all_set);
SEQAN_CALL_TEST(test_argument_double);
SEQAN_CALL_TEST(test_argument_not_a_double);
SEQAN_CALL_TEST(test_argument_auto_file_ext_option); // automatic --${name}-file-ext option.
// Test list of n-tuples arguments
SEQAN_CALL_TEST(test_int_list_option);
SEQAN_CALL_TEST(test_double_list_option);
SEQAN_CALL_TEST(test_double_list_option_not_enough_arguments);
// Test bools
SEQAN_CALL_TEST(test_boolean_argument_on);
SEQAN_CALL_TEST(test_boolean_argument_off);
SEQAN_CALL_TEST(test_boolean_flags);
SEQAN_CALL_TEST(test_combined_boolean_flags);
SEQAN_CALL_TEST(test_long_short_flag_name);
// cmd argument tests
SEQAN_CALL_TEST(test_argument_string_type);
SEQAN_CALL_TEST(test_argument_int_type);
SEQAN_CALL_TEST(test_argument_int64_type);
SEQAN_CALL_TEST(test_argument_double_type);
SEQAN_CALL_TEST(test_argument_inputfile_type);
SEQAN_CALL_TEST(test_argument_outputfile_type);
SEQAN_CALL_TEST(test_argument_inputprefix_type);
SEQAN_CALL_TEST(test_argument_outputprefix_type);
SEQAN_CALL_TEST(test_argument_label);
SEQAN_CALL_TEST(test_argument_invalid_cast);
SEQAN_CALL_TEST(test_argument_min_max_boundaries);
SEQAN_CALL_TEST(test_argument_valid_values);
SEQAN_CALL_TEST(test_argument_valid_values_directories);
SEQAN_CALL_TEST(test_argument_parser);
SEQAN_CALL_TEST(test_parse_non_const_cstring);
// default value test
SEQAN_CALL_TEST(test_default_value);
// conversion tests
SEQAN_CALL_TEST(test_isDouble);
SEQAN_CALL_TEST(test_isInt);
// ctd tests
SEQAN_CALL_TEST(test_arg_parse_ctd_support);
}
SEQAN_END_TESTSUITE
|
