1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121
|
// ==========================================================================
// SeqAn - The Library for Sequence Analysis
// ==========================================================================
// Copyright (c) 2006-2018, Knut Reinert, FU Berlin
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
// * Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
// * Neither the name of Knut Reinert or the FU Berlin nor the names of
// its contributors may be used to endorse or promote products derived
// from this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL KNUT REINERT OR THE FU BERLIN BE LIABLE
// FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
// DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
// SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
// CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
// LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
// OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
// DAMAGE.
//
// ==========================================================================
// Author: Manuel Holtgrewe <manuel.holtgrew@fu-berlin.de>
// ==========================================================================
// Tests for the module parallel.
// ==========================================================================
#include <seqan/basic.h> // Testing infrastructure.
#include <seqan/stream.h> // Required to print strings in tests.
#include <seqan/parallel.h> // Header under test.
#if defined(_OPENMP)
#include <omp.h>
#endif // #if defined(_OPENMP)
#include "test_parallel_atomic_primitives.h"
#include "test_parallel_atomic_misc.h"
#include "test_parallel_splitting.h"
#include "test_parallel_algorithms.h"
#include "test_parallel_queue.h"
#include "test_parallel_thread_pool.h"
#include "test_parallel_enumerable_thread_local.h"
SEQAN_BEGIN_TESTSUITE(test_parallel) {
#if defined(_OPENMP)
// Set number of threads to >=2 so there actually is parallelism.
if (omp_get_max_threads() < 2)
omp_set_num_threads(2);
std::cout << "PARALLELISM ENABLED (CTEST_FULL_OUTPUT)" << std::endl;
#endif // #if defined(_OPENMP)
// TODO(holtgrew): Re-enable tests on LLVM when bug 9041 is fixed.
// LLVM has problems with atomic operation builtins, re-enable when
// this problem is fixed. See http://llvm.org/bugs/show_bug.cgi?id=9041
//
// There is a problem with compare-and-swap on MinGW, too.
#if !defined(__llvm__)
// Tests for atomic primitives.
SEQAN_CALL_TEST(test_parallel_atomic_inc);
SEQAN_CALL_TEST(test_parallel_atomic_dec);
SEQAN_CALL_TEST(test_parallel_atomic_add);
SEQAN_CALL_TEST(test_parallel_atomic_or);
SEQAN_CALL_TEST(test_parallel_atomic_xor);
SEQAN_CALL_TEST(test_parallel_atomic_cas);
// Tests for misc simpmle atomic operations.
SEQAN_CALL_TEST(test_parallel_atomic_min);
SEQAN_CALL_TEST(test_parallel_atomic_max);
#endif // #if !defined(__llvm__)
SEQAN_CALL_TEST(test_parallel_splitter_equidistant);
SEQAN_CALL_TEST(test_parallel_splitting_compute_splitters);
SEQAN_CALL_TEST(test_parallel_sum);
SEQAN_CALL_TEST(test_parallel_partial_sum);
// Tests for parallel queue.
SEQAN_CALL_TEST(test_parallel_queue_simple);
SEQAN_CALL_TEST(test_parallel_queue_resize);
SEQAN_CALL_TEST(test_parallel_queue_non_pod);
if (std::thread::hardware_concurrency() >= 2u)
{
SEQAN_CALL_TEST(test_parallel_queue_spsc_fixedsize);
SEQAN_CALL_TEST(test_parallel_queue_spsc_dynamicsize);
SEQAN_CALL_TEST(test_parallel_queue_spmc_fixedsize);
SEQAN_CALL_TEST(test_parallel_queue_spmc_dynamicsize);
SEQAN_CALL_TEST(test_parallel_queue_mpsc_fixedsize);
// SEQAN_CALL_TEST(test_parallel_queue_mpsc_dynamicsize);
// SEQAN_CALL_TEST(test_parallel_queue_mpmc_fixedsize);
// SEQAN_CALL_TEST(test_parallel_queue_mpmc_dynamicsize);
}
// -----------------------------------------------------------------------
// Test thread pool.
// -----------------------------------------------------------------------
SEQAN_CALL_TEST(test_parallel_thread_pool_construct);
SEQAN_CALL_TEST(test_parallel_thread_pool_spawn);
SEQAN_CALL_TEST(test_parallel_thread_pool_join);
SEQAN_CALL_TEST(test_parallel_thread_pool_destruct);
// -----------------------------------------------------------------------
// Test Enumerable Thread Specific.
// -----------------------------------------------------------------------
SEQAN_CALL_TEST(test_parallel_enumerable_thread_local_construct);
SEQAN_CALL_TEST(test_parallel_enumerable_thread_local_local);
SEQAN_CALL_TEST(test_parallel_enumerable_thread_local_enumerate);
SEQAN_CALL_TEST(test_parallel_enumerable_thread_local_combine_unary);
SEQAN_CALL_TEST(test_parallel_enumerable_thread_local_combine_binary);
}
SEQAN_END_TESTSUITE
|