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seqan2 2.4.0+dfsg-11~bpo9+1
  • links: PTS, VCS
  • area: main
  • in suites: stretch-backports
  • size: 223,500 kB
  • sloc: cpp: 256,886; ansic: 91,672; python: 8,339; sh: 995; xml: 570; makefile: 251; awk: 51

Folder: align

d .. (parent)
- - rw-r--r-- 5,423 CMakeLists.txt
- - rw-r--r-- 36,887 test_align.cpp
- - rw-r--r-- 13,312 test_align_align.h
- - rw-r--r-- 9,265 test_align_alignment_operations.h
- - rw-r--r-- 6,589 test_align_fragment.h
- - rw-r--r-- 53,489 test_align_gaps.h
- - rw-r--r-- 35,200 test_align_gaps_iterator.h
- - rw-r--r-- 40,093 test_align_global_alignment.h
- - rw-r--r-- 40,613 test_align_global_alignment_banded.h
- - rw-r--r-- 8,846 test_align_global_alignment_score.h
- - rw-r--r-- 9,496 test_align_global_alignment_specialized.h
- - rw-r--r-- 24,787 test_align_local_alignment.h
- - rw-r--r-- 3,716 test_align_matrix.h
- - rw-r--r-- 8,516 test_align_myers.h
- - rw-r--r-- 10,779 test_align_simd_base.h
- - rw-r--r-- 6,097 test_align_simd_global.h
- - rw-r--r-- 3,855 test_align_simd_global_equal_length.cpp
- - rw-r--r-- 3,292 test_align_simd_global_variable_length.cpp
- - rw-r--r-- 6,058 test_align_simd_local.h
- - rw-r--r-- 2,945 test_align_simd_local_equal_length.cpp
- - rw-r--r-- 2,834 test_align_simd_local_variable_length.cpp
- - rw-r--r-- 4,218 test_align_stream.h
- - rw-r--r-- 70,907 test_alignment_algorithms_band_position.h
- - rw-r--r-- 11,073 test_alignment_algorithms_dynamic_gap.h
- - rw-r--r-- 86,287 test_alignment_algorithms_global.h
- - rw-r--r-- 64,153 test_alignment_algorithms_global_banded.h
- - rw-r--r-- 22,697 test_alignment_algorithms_local.h
- - rw-r--r-- 18,995 test_alignment_algorithms_local_banded.h
- - rw-r--r-- 15,366 test_alignment_dp_adapt_tracesegments.h
- - rw-r--r-- 4,309 test_alignment_dp_band.h
- - rw-r--r-- 10,106 test_alignment_dp_cell.h
- - rw-r--r-- 169,796 test_alignment_dp_formula.h
- - rw-r--r-- 36,094 test_alignment_dp_matrix.h
- - rw-r--r-- 34,962 test_alignment_dp_matrix_navigator.h
- - rw-r--r-- 11,781 test_alignment_dp_profile.h
- - rw-r--r-- 12,814 test_alignment_dp_trace_segment.h
- - rw-r--r-- 32,297 test_alignment_dp_traceback.h
- - rw-r--r-- 3,525 test_evaluate_alignment.h
- - rw-r--r-- 9,695 test_local_align.h
- - rw-r--r-- 10,488 test_mock.h