package info (click to toggle)
seqan2 2.5.2-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 228,748 kB
  • sloc: cpp: 257,602; ansic: 91,967; python: 8,326; sh: 1,056; xml: 570; makefile: 229; awk: 51; javascript: 21

Folder: tests

d .. (parent)
- - rw-r--r-- 4,859 adeno-genome.fa
- - rw-r--r-- 531,724 adeno-reads-pe.sam
- - rw-r--r-- 133,000 adeno-reads100_1.fa
- - rw-r--r-- 133,000 adeno-reads100_2.fa
- - rw-r--r-- 325 anchored_adeno_example100.out
- - rw-r--r-- 0 anchored_adeno_example100.stdout
- - rwxr-xr-x 2,538 generate_outputs.sh
- - rwxr-xr-x 10,276 run_tests.py
- - rw-r--r-- 112,211 se-adeno-reads100_1_default.out
- - rw-r--r-- 0 se-adeno-reads100_1_default.stdout
- - rw-r--r-- 91,368 se-adeno-reads100_1_mml16_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml16_ep0_es0.stdout
- - rw-r--r-- 99,723 se-adeno-reads100_1_mml16_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml16_ep0_es1.stdout
- - rw-r--r-- 101,459 se-adeno-reads100_1_mml16_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml16_ep0_es2.stdout
- - rw-r--r-- 101,380 se-adeno-reads100_1_mml16_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml16_ep1_es0.stdout
- - rw-r--r-- 110,499 se-adeno-reads100_1_mml16_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml16_ep1_es1.stdout
- - rw-r--r-- 112,527 se-adeno-reads100_1_mml16_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml16_ep1_es2.stdout
- - rw-r--r-- 87,703 se-adeno-reads100_1_mml17_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml17_ep0_es0.stdout
- - rw-r--r-- 98,555 se-adeno-reads100_1_mml17_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml17_ep0_es1.stdout
- - rw-r--r-- 100,604 se-adeno-reads100_1_mml17_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml17_ep0_es2.stdout
- - rw-r--r-- 100,317 se-adeno-reads100_1_mml17_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml17_ep1_es0.stdout
- - rw-r--r-- 112,060 se-adeno-reads100_1_mml17_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml17_ep1_es1.stdout
- - rw-r--r-- 114,401 se-adeno-reads100_1_mml17_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml17_ep1_es2.stdout
- - rw-r--r-- 84,643 se-adeno-reads100_1_mml18_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml18_ep0_es0.stdout
- - rw-r--r-- 96,692 se-adeno-reads100_1_mml18_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml18_ep0_es1.stdout
- - rw-r--r-- 99,335 se-adeno-reads100_1_mml18_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml18_ep0_es2.stdout
- - rw-r--r-- 99,296 se-adeno-reads100_1_mml18_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml18_ep1_es0.stdout
- - rw-r--r-- 112,211 se-adeno-reads100_1_mml18_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml18_ep1_es1.stdout
- - rw-r--r-- 115,312 se-adeno-reads100_1_mml18_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml18_ep1_es2.stdout
- - rw-r--r-- 82,541 se-adeno-reads100_1_mml19_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml19_ep0_es0.stdout
- - rw-r--r-- 95,737 se-adeno-reads100_1_mml19_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml19_ep0_es1.stdout
- - rw-r--r-- 97,893 se-adeno-reads100_1_mml19_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml19_ep0_es2.stdout
- - rw-r--r-- 99,529 se-adeno-reads100_1_mml19_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml19_ep1_es0.stdout
- - rw-r--r-- 113,730 se-adeno-reads100_1_mml19_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml19_ep1_es1.stdout
- - rw-r--r-- 116,344 se-adeno-reads100_1_mml19_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml19_ep1_es2.stdout
- - rw-r--r-- 12,343 se-adeno-reads100_1_mml20-f_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-f_ep1_es1.stdout
- - rw-r--r-- 55,989 se-adeno-reads100_1_mml20-i100_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i100_ep1_es1.stdout
- - rw-r--r-- 114,538 se-adeno-reads100_1_mml20-i90_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i90_ep1_es1.stdout
- - rw-r--r-- 114,538 se-adeno-reads100_1_mml20-i91_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i91_ep1_es1.stdout
- - rw-r--r-- 114,538 se-adeno-reads100_1_mml20-i92_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i92_ep1_es1.stdout
- - rw-r--r-- 114,179 se-adeno-reads100_1_mml20-i93_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i93_ep1_es1.stdout
- - rw-r--r-- 114,019 se-adeno-reads100_1_mml20-i94_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i94_ep1_es1.stdout
- - rw-r--r-- 114,019 se-adeno-reads100_1_mml20-i95_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i95_ep1_es1.stdout
- - rw-r--r-- 114,019 se-adeno-reads100_1_mml20-i96_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i96_ep1_es1.stdout
- - rw-r--r-- 113,709 se-adeno-reads100_1_mml20-i97_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i97_ep1_es1.stdout
- - rw-r--r-- 111,009 se-adeno-reads100_1_mml20-i98_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i98_ep1_es1.stdout
- - rw-r--r-- 96,542 se-adeno-reads100_1_mml20-i99_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-i99_ep1_es1.stdout
- - rw-r--r-- 114,538 se-adeno-reads100_1_mml20-of3_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-of3_ep1_es1.stdout
- - rw-r--r-- 167,678 se-adeno-reads100_1_mml20-of4_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-of4_ep1_es1.stdout
- - rw-r--r-- 16,458 se-adeno-reads100_1_mml20-r_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-r_ep1_es1.stdout
- - rw-r--r-- 114,538 se-adeno-reads100_1_mml20-so0_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-so0_ep1_es1.stdout
- - rw-r--r-- 114,538 se-adeno-reads100_1_mml20-so1_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20-so1_ep1_es1.stdout
- - rw-r--r-- 80,614 se-adeno-reads100_1_mml20_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20_ep0_es0.stdout
- - rw-r--r-- 95,166 se-adeno-reads100_1_mml20_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20_ep0_es1.stdout
- - rw-r--r-- 97,633 se-adeno-reads100_1_mml20_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20_ep0_es2.stdout
- - rw-r--r-- 98,840 se-adeno-reads100_1_mml20_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20_ep1_es0.stdout
- - rw-r--r-- 114,538 se-adeno-reads100_1_mml20_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20_ep1_es1.stdout
- - rw-r--r-- 117,297 se-adeno-reads100_1_mml20_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml20_ep1_es2.stdout
- - rw-r--r-- 79,634 se-adeno-reads100_1_mml21_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml21_ep0_es0.stdout
- - rw-r--r-- 95,165 se-adeno-reads100_1_mml21_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml21_ep0_es1.stdout
- - rw-r--r-- 97,320 se-adeno-reads100_1_mml21_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml21_ep0_es2.stdout
- - rw-r--r-- 98,848 se-adeno-reads100_1_mml21_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml21_ep1_es0.stdout
- - rw-r--r-- 115,520 se-adeno-reads100_1_mml21_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml21_ep1_es1.stdout
- - rw-r--r-- 117,967 se-adeno-reads100_1_mml21_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml21_ep1_es2.stdout
- - rw-r--r-- 77,089 se-adeno-reads100_1_mml22_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml22_ep0_es0.stdout
- - rw-r--r-- 94,791 se-adeno-reads100_1_mml22_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml22_ep0_es1.stdout
- - rw-r--r-- 97,084 se-adeno-reads100_1_mml22_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml22_ep0_es2.stdout
- - rw-r--r-- 98,633 se-adeno-reads100_1_mml22_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml22_ep1_es0.stdout
- - rw-r--r-- 117,924 se-adeno-reads100_1_mml22_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml22_ep1_es1.stdout
- - rw-r--r-- 120,509 se-adeno-reads100_1_mml22_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml22_ep1_es2.stdout
- - rw-r--r-- 75,553 se-adeno-reads100_1_mml23_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml23_ep0_es0.stdout
- - rw-r--r-- 92,945 se-adeno-reads100_1_mml23_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml23_ep0_es1.stdout
- - rw-r--r-- 95,511 se-adeno-reads100_1_mml23_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml23_ep0_es2.stdout
- - rw-r--r-- 97,948 se-adeno-reads100_1_mml23_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml23_ep1_es0.stdout
- - rw-r--r-- 117,086 se-adeno-reads100_1_mml23_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml23_ep1_es1.stdout
- - rw-r--r-- 120,088 se-adeno-reads100_1_mml23_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml23_ep1_es2.stdout
- - rw-r--r-- 74,159 se-adeno-reads100_1_mml24_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml24_ep0_es0.stdout
- - rw-r--r-- 92,097 se-adeno-reads100_1_mml24_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml24_ep0_es1.stdout
- - rw-r--r-- 94,803 se-adeno-reads100_1_mml24_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml24_ep0_es2.stdout
- - rw-r--r-- 96,526 se-adeno-reads100_1_mml24_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml24_ep1_es0.stdout
- - rw-r--r-- 116,034 se-adeno-reads100_1_mml24_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml24_ep1_es1.stdout
- - rw-r--r-- 119,339 se-adeno-reads100_1_mml24_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml24_ep1_es2.stdout
- - rw-r--r-- 72,872 se-adeno-reads100_1_mml25_ep0_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml25_ep0_es0.stdout
- - rw-r--r-- 90,952 se-adeno-reads100_1_mml25_ep0_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml25_ep0_es1.stdout
- - rw-r--r-- 93,938 se-adeno-reads100_1_mml25_ep0_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml25_ep0_es2.stdout
- - rw-r--r-- 94,966 se-adeno-reads100_1_mml25_ep1_es0.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml25_ep1_es0.stdout
- - rw-r--r-- 114,894 se-adeno-reads100_1_mml25_ep1_es1.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml25_ep1_es1.stdout
- - rw-r--r-- 118,316 se-adeno-reads100_1_mml25_ep1_es2.out
- - rw-r--r-- 0 se-adeno-reads100_1_mml25_ep1_es2.stdout