File: modified_string.cpp

package info (click to toggle)
seqan2 2.5.2-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 228,748 kB
  • sloc: cpp: 257,602; ansic: 91,967; python: 8,326; sh: 1,056; xml: 570; makefile: 229; awk: 51; javascript: 21
file content (21 lines) | stat: -rw-r--r-- 490 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
#include <seqan/basic.h>
#include <seqan/sequence.h>
#include <seqan/stream.h>  // for I/O
#include <seqan/modifier.h>

using namespace seqan2;

int main()
{
    String<Dna> seq = "TATACGCGAAAA";
    ModifiedString<String<Dna>, ModReverse> myModifier(seq);

    std::cout << seq << std::endl;
    std::cout << myModifier << std::endl;
    replace(seq, 8, 12, "TTTT");
    std::cout << std::endl;
    std::cout << seq << std::endl;
    std::cout << myModifier << std::endl;

    return 0;
}