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BLASTX 2.2.26+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: /foo/bar/uniprot_sprot.fasta
538,259 sequences; 191,113,170 total letters
[...]
Query= SHAA004TR Sample 1 Mate SHAA004TF trimmed_to 20 853
Length=833
Score E
Sequences producing significant alignments: (Bits) Value
sp|Q0HTA5|META_SHESR Homoserine O-succinyltransferase OS=Shewan... 152 3e-42
sp|Q0HGZ8|META_SHESM Homoserine O-succinyltransferase OS=Shewan... 152 3e-42
> sp|Q0HTA5|META_SHESR Homoserine O-succinyltransferase OS=Shewanella
sp. (strain MR-7) GN=metA PE=3 SV=1
Length=313
Score = 152 bits (385), Expect = 3e-42
Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)
Frame = -2
Query 232 MPVKIPDHLPAAGILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN 53
MPVKIPDHLPAAGILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN
Sbjct 1 MPVKIPDHLPAAGILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN 60
Query 52 TPLQVDVDLLRIHDKES 2
TPLQVDVDLLRIHDKES
Sbjct 61 TPLQVDVDLLRIHDKES 77
> sp|Q0HGZ8|META_SHESM Homoserine O-succinyltransferase OS=Shewanella
sp. (strain MR-4) GN=metA PE=3 SV=1
Length=313
Score = 152 bits (385), Expect = 3e-42
Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)
Frame = -2
Query 232 MPVKIPDHLPAAGILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN 53
MPVKIPDHLPAAGILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN
Sbjct 1 MPVKIPDHLPAAGILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN 60
Query 52 TPLQVDVDLLRIHDKES 2
TPLQVDVDLLRIHDKES
Sbjct 61 TPLQVDVDLLRIHDKES 77
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 20716695286
[...]
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