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seqan2 2.5.2-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 228,748 kB
  • sloc: cpp: 257,602; ansic: 91,967; python: 8,326; sh: 1,056; xml: 570; makefile: 229; awk: 51; javascript: 21

Folder: align

d .. (parent)
- - rw-r--r-- 5,656 CMakeLists.txt
- - rw-r--r-- 37,000 test_align.cpp
- - rw-r--r-- 13,313 test_align_align.h
- - rw-r--r-- 9,267 test_align_alignment_operations.h
- - rw-r--r-- 6,099 test_align_bugs.cpp
- - rw-r--r-- 6,591 test_align_fragment.h
- - rw-r--r-- 53,569 test_align_gaps.h
- - rw-r--r-- 35,239 test_align_gaps_iterator.h
- - rw-r--r-- 40,111 test_align_global_alignment.h
- - rw-r--r-- 40,631 test_align_global_alignment_banded.h
- - rw-r--r-- 8,853 test_align_global_alignment_score.h
- - rw-r--r-- 9,504 test_align_global_alignment_specialized.h
- - rw-r--r-- 24,801 test_align_local_alignment.h
- - rw-r--r-- 3,717 test_align_matrix.h
- - rw-r--r-- 8,517 test_align_myers.h
- - rw-r--r-- 10,803 test_align_simd_base.h
- - rw-r--r-- 6,117 test_align_simd_global.h
- - rw-r--r-- 3,881 test_align_simd_global_equal_length.cpp
- - rw-r--r-- 3,306 test_align_simd_global_variable_length.cpp
- - rw-r--r-- 6,078 test_align_simd_local.h
- - rw-r--r-- 2,953 test_align_simd_local_equal_length.cpp
- - rw-r--r-- 2,839 test_align_simd_local_variable_length.cpp
- - rw-r--r-- 4,228 test_align_stream.h
- - rw-r--r-- 70,938 test_alignment_algorithms_band_position.h
- - rw-r--r-- 11,111 test_alignment_algorithms_dynamic_gap.h
- - rw-r--r-- 87,347 test_alignment_algorithms_global.h
- - rw-r--r-- 64,180 test_alignment_algorithms_global_banded.h
- - rw-r--r-- 22,709 test_alignment_algorithms_local.h
- - rw-r--r-- 19,006 test_alignment_algorithms_local_banded.h
- - rw-r--r-- 15,378 test_alignment_dp_adapt_tracesegments.h
- - rw-r--r-- 4,316 test_alignment_dp_band.h
- - rw-r--r-- 10,883 test_alignment_dp_cell.h
- - rw-r--r-- 169,726 test_alignment_dp_formula.h
- - rw-r--r-- 36,166 test_alignment_dp_matrix.h
- - rw-r--r-- 34,994 test_alignment_dp_matrix_navigator.h
- - rw-r--r-- 11,785 test_alignment_dp_profile.h
- - rw-r--r-- 12,828 test_alignment_dp_trace_segment.h
- - rw-r--r-- 32,306 test_alignment_dp_traceback.h
- - rw-r--r-- 3,531 test_evaluate_alignment.h
- - rw-r--r-- 9,696 test_local_align.h
- - rw-r--r-- 10,527 test_mock.h