File: example.sth

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# STOCKHOLM 1.0
#=GF ID    trna
#=GF DE    Taken from Sprinzl alignment of 1415 tRNAs [Steinberg93]

DF6280             GCGGAUUUAGCUCAGUUGGG.AGAGCGCCAGACUGAAGAUCUGGAGGUCC
DE6280             UCCGAUAUAGUGUAAC.GGCUAUCACAUCACGCUUUCACCGUGGAGA.CC
DD6280             UCCGUGAUAGUUUAAU.GGUCAGAAUGGGCGCUUGUCGCGUGCCAGA.UC
DC6280             GCUCGUAUGGCGCAGU.GGU.AGCGCAGCAGAUUGCAAAUCUGUUGGUCC
DA6280             GGGCACAUGGCGCAGUUGGU.AGCGCGCUUCCCUUGCAAGGAAGAGGUCA
#=GC SS_cons       <<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<
#=GC RF            xxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx

DF6280             UGUGUUCGAUCCACAGAAUUCGCA
DE6280             GGGGUUCGACUCCCCGUAUCGGAG
DD6280             GGGGUUCAAUUCCCCGUCGCGGAG
DC6280             UUAGUUCGAUCCUGAGUGCGAGCU
DA6280             UCGGUUCGAUUCCGGUUGCGUCCA
#=GC SS_cons       <<<<.......>>>>>>>>>>>>.
#=GC RF            xxxxxxxxxxxxxxxxxxxxxxxx
//