1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38
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# Matrix made by matblas from blosum30.iij
# * column uses minimum score
# BLOSUM Clustered Scoring Matrix in 1/5 Bit Units
# Blocks Database = /data/blocks_5.0/blocks.dat
# Cluster Percentage: >= 30
# Entropy = 0.1424, Expected = -0.1074
#
# add J-Column as (I+L)/2 and U == X
# reordered to be (alphabetically sorted; X *)
A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *
A 4 0 -3 0 0 -2 0 -2 0 -1 0 -1 1 0 0 -1 1 -1 1 1 0 1 -5 -4 0 0 -7
B 0 5 -2 5 0 -3 0 -2 -2 -2 0 -1 -2 4 -1 -2 -1 -2 0 0 -1 -2 -5 -3 0 -1 -7
C -3 -2 17 -3 1 -3 -4 -5 -2 -1 -3 0 -2 -1 -2 -3 -2 -2 -2 -2 -2 -2 -2 -6 0 -2 -7
D 0 5 -3 9 1 -5 -1 -2 -4 -3 0 -1 -3 1 -1 -1 -1 -1 0 -1 -1 -2 -4 -1 0 -1 -7
E 0 0 1 1 6 -4 -2 0 -3 -2 2 -1 -1 -1 -1 1 2 -1 0 -2 -1 -3 -1 -2 5 -1 -7
F -2 -3 -3 -5 -4 10 -3 -3 0 1 -1 2 -2 -1 -1 -4 -3 -1 -1 -2 -1 1 1 3 -4 -1 -7
G 0 0 -4 -1 -2 -3 8 -3 -1 -2 -1 -2 -2 0 -1 -1 -2 -2 0 -2 -1 -3 1 -3 -2 -1 -7
H -2 -2 -5 -2 0 -3 -3 14 -2 -2 -2 -1 2 -1 -1 1 0 -1 -1 -2 -1 -3 -5 0 0 -1 -7
I 0 -2 -2 -4 -3 0 -1 -2 6 4 -2 2 1 0 0 -3 -2 -3 -1 0 0 4 -3 -1 -3 0 -7
J -1 -2 -1 -3 -2 1 -2 -2 4 4 -2 3 2 -1 0 -3 -2 -3 -2 0 0 3 -3 1 -2 0 -7
K 0 0 -3 0 2 -1 -1 -2 -2 -2 4 -2 2 0 0 1 0 1 0 -1 0 -2 -2 -1 1 0 -7
L -1 -1 0 -1 -1 2 -2 -1 2 3 -2 4 2 -2 0 -3 -2 -2 -2 0 0 1 -2 3 -1 0 -7
M 1 -2 -2 -3 -1 -2 -2 2 1 2 2 2 6 0 0 -4 -1 0 -2 0 0 0 -3 -1 -1 0 -7
N 0 4 -1 1 -1 -1 0 -1 0 -1 0 -2 0 8 0 -3 -1 -2 0 1 0 -2 -7 -4 -1 0 -7
O 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 0 -1 0 0 -1 0 -2 -1 0 -1 -7
P -1 -2 -3 -1 1 -4 -1 1 -3 -3 1 -3 -4 -3 -1 11 0 -1 -1 0 -1 -4 -3 -2 0 -1 -7
Q 1 -1 -2 -1 2 -3 -2 0 -2 -2 0 -2 -1 -1 0 0 8 3 -1 0 0 -3 -1 -1 4 0 -7
R -1 -2 -2 -1 -1 -1 -2 -1 -3 -3 1 -2 0 -2 -1 -1 3 8 -1 -3 -1 -1 0 0 0 -1 -7
S 1 0 -2 0 0 -1 0 -1 -1 -2 0 -2 -2 0 0 -1 -1 -1 4 2 0 -1 -3 -2 -1 0 -7
T 1 0 -2 -1 -2 -2 -2 -2 0 0 -1 0 0 1 0 0 0 -3 2 5 0 1 -5 -1 -1 0 -7
U 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 0 -1 0 0 -1 0 -2 -1 0 -1 -7
V 1 -2 -2 -2 -3 1 -3 -3 4 3 -2 1 0 -2 0 -4 -3 -1 -1 1 0 5 -3 1 -3 0 -7
W -5 -5 -2 -4 -1 1 1 -5 -3 -3 -2 -2 -3 -7 -2 -3 -1 0 -3 -5 -2 -3 20 5 -1 -2 -7
Y -4 -3 -6 -1 -2 3 -3 0 -1 1 -1 3 -1 -4 -1 -2 -1 0 -2 -1 -1 1 5 9 -2 -1 -7
Z 0 0 0 0 5 -4 -2 0 -3 -2 1 -1 -1 -1 0 0 4 0 -1 -1 0 -3 -1 -2 4 0 -7
X 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 0 -1 0 0 -1 0 -2 -1 0 -1 -7
* -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 1
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