1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37
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# Matrix made by matblas from blosum45.iij
# * column uses minimum score
# BLOSUM Clustered Scoring Matrix in 1/3 Bit Units
# Blocks Database = /data/blocks_5.0/blocks.dat
# Cluster Percentage: >= 45
# Entropy = 0.3795, Expected = -0.2789
#
# add J-Column as (I+L)/2 and U == X
# reordered to be (alphabetically sorted; X *)
A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *
A 5 -1 -1 -2 -1 -2 0 -2 -1 -1 -1 -1 -1 -1 0 -1 -1 -2 1 0 0 0 -2 -2 -1 0 -5
B -1 4 -2 5 1 -3 -1 0 -3 -3 0 -3 -2 4 -1 -2 0 -1 0 0 -1 -3 -4 -2 2 -1 -5
C -1 -2 12 -3 -3 -2 -3 -3 -3 -3 -3 -2 -2 -2 -2 -4 -3 -3 -1 -1 -2 -1 -5 -3 -3 -2 -5
D -2 5 -3 7 2 -4 -1 0 -4 -4 0 -3 -3 2 -1 -1 0 -1 0 -1 -1 -3 -4 -2 1 -1 -5
E -1 1 -3 2 6 -3 -2 0 -3 -3 1 -2 -2 0 -1 0 2 0 0 -1 -1 -3 -3 -2 4 -1 -5
F -2 -3 -2 -4 -3 8 -3 -2 0 1 -3 1 0 -2 -1 -3 -4 -2 -2 -1 -1 0 1 3 -3 -1 -5
G 0 -1 -3 -1 -2 -3 7 -2 -4 -4 -2 -3 -2 0 -1 -2 -2 -2 0 -2 -1 -3 -2 -3 -2 -1 -5
H -2 0 -3 0 0 -2 -2 10 -3 -3 -1 -2 0 1 -1 -2 1 0 -1 -2 -1 -3 -3 2 0 -1 -5
I -1 -3 -3 -4 -3 0 -4 -3 5 4 -3 2 2 -2 -1 -2 -2 -3 -2 -1 -1 3 -2 0 -3 -1 -5
J -1 -3 -3 -4 -3 1 -4 -3 4 4 -3 4 2 -3 -1 -3 -2 -3 -3 -1 -1 2 -2 0 -3 -1 -5
K -1 0 -3 0 1 -3 -2 -1 -3 -3 5 -3 -1 0 -1 -1 1 3 -1 -1 -1 -2 -2 -1 1 -1 -5
L -1 -3 -2 -3 -2 1 -3 -2 2 4 -3 5 2 -3 -1 -3 -2 -2 -3 -1 -1 1 -2 0 -2 -1 -5
M -1 -2 -2 -3 -2 0 -2 0 2 2 -1 2 6 -2 -1 -2 0 -1 -2 -1 -1 1 -2 0 -1 -1 -5
N -1 4 -2 2 0 -2 0 1 -2 -3 0 -3 -2 6 -1 -2 0 0 1 0 -1 -3 -4 -2 0 -1 -5
O 0 -1 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 0 0 -1 -1 -2 -1 -1 -1 -5
P -1 -2 -4 -1 0 -3 -2 -2 -2 -3 -1 -3 -2 -2 -1 9 -1 -2 -1 -1 -1 -3 -3 -3 -1 -1 -5
Q -1 0 -3 0 2 -4 -2 1 -2 -2 1 -2 0 0 -1 -1 6 1 0 -1 -1 -3 -2 -1 4 -1 -5
R -2 -1 -3 -1 0 -2 -2 0 -3 -3 3 -2 -1 0 -1 -2 1 7 -1 -1 -1 -2 -2 -1 0 -1 -5
S 1 0 -1 0 0 -2 0 -1 -2 -3 -1 -3 -2 1 0 -1 0 -1 4 2 0 -1 -4 -2 0 0 -5
T 0 0 -1 -1 -1 -1 -2 -2 -1 -1 -1 -1 -1 0 0 -1 -1 -1 2 5 0 0 -3 -1 -1 0 -5
U 0 -1 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 0 0 -1 -1 -2 -1 -1 -1 -5
V 0 -3 -1 -3 -3 0 -3 -3 3 2 -2 1 1 -3 -1 -3 -3 -2 -1 0 -1 5 -3 -1 -3 -1 -5
W -2 -4 -5 -4 -3 1 -2 -3 -2 -2 -2 -2 -2 -4 -2 -3 -2 -2 -4 -3 -2 -3 15 3 -2 -2 -5
Y -2 -2 -3 -2 -2 3 -3 2 0 0 -1 0 0 -2 -1 -3 -1 -1 -2 -1 -1 -1 3 8 -2 -1 -5
Z -1 2 -3 1 4 -3 -2 0 -3 -3 1 -2 -1 0 -1 -1 4 0 0 -1 -1 -3 -2 -2 4 -1 -5
X 0 -1 -2 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 0 0 -1 -1 -2 -1 -1 -1 -5
* -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 -5 1
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