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// -----------------------------------------------------------------------------------------------------
// Copyright (c) 2006-2020, Knut Reinert & Freie Universität Berlin
// Copyright (c) 2016-2020, Knut Reinert & MPI für molekulare Genetik
// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
// -----------------------------------------------------------------------------------------------------
#include <gtest/gtest.h>
#include <type_traits>
#include <seqan3/alignment/configuration/align_config_band.hpp>
#include <seqan3/core/algorithm/configuration.hpp>
#include "../../core/algorithm/pipeable_config_element_test_template.hpp"
using test_types = ::testing::Types<seqan3::align_cfg::band_fixed_size>;
INSTANTIATE_TYPED_TEST_SUITE_P(band_elements, pipeable_config_element_test, test_types, );
TEST(band_fixed_size, config_element_specialisation)
{
EXPECT_TRUE((seqan3::detail::config_element_specialisation<seqan3::align_cfg::band_fixed_size>));
}
TEST(band_fixed_size, construct)
{
using seqan3::get;
constexpr int32_t minus_infinity = std::numeric_limits<int32_t>::lowest();
constexpr int32_t plus_infinity = std::numeric_limits<int32_t>::max();
{ // Default construct
seqan3::align_cfg::band_fixed_size band_config{};
EXPECT_EQ(band_config.lower_diagonal, minus_infinity);
EXPECT_EQ(band_config.upper_diagonal, plus_infinity);
}
{ // Construct with parameter
seqan3::align_cfg::band_fixed_size band_config{seqan3::align_cfg::lower_diagonal{-5},
seqan3::align_cfg::upper_diagonal{5}};
EXPECT_EQ(band_config.lower_diagonal, -5);
EXPECT_EQ(band_config.upper_diagonal, 5);
}
}
TEST(band_fixed_size, assign)
{
seqan3::align_cfg::band_fixed_size band_config{};
band_config.lower_diagonal = -5;
band_config.upper_diagonal = 5;
EXPECT_EQ(band_config.lower_diagonal, -5);
EXPECT_EQ(band_config.upper_diagonal, 5);
}
TEST(band_fixed_size, get_and_assign)
{
using seqan3::get;
seqan3::align_cfg::band_fixed_size band_config{seqan3::align_cfg::lower_diagonal{-5},
seqan3::align_cfg::upper_diagonal{5}};
seqan3::configuration config{band_config};
auto & selected_band_config = get<seqan3::align_cfg::band_fixed_size>(config);
EXPECT_EQ(selected_band_config.lower_diagonal, -5);
EXPECT_EQ(selected_band_config.upper_diagonal, 5);
selected_band_config.lower_diagonal = -4;
selected_band_config.upper_diagonal = 8;
EXPECT_EQ(get<seqan3::align_cfg::band_fixed_size>(config).lower_diagonal, -4);
EXPECT_EQ(get<seqan3::align_cfg::band_fixed_size>(config).upper_diagonal, 8);
}
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