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// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
// SPDX-License-Identifier: CC0-1.0
#include <iostream>
#include <ranges> // include all of the standard library's views
#include <vector>
#include <seqan3/alphabet/nucleotide/dna4.hpp>
#include <seqan3/search/views/kmer_hash.hpp>
#include <seqan3/search/views/minimiser.hpp>
using namespace seqan3::literals;
int main()
{
std::vector<seqan3::dna4> text{"CCACGTCGACGGTT"_dna4};
{
//![minimiser]
//![def]
auto minimisers = text | seqan3::views::kmer_hash(seqan3::ungapped{4}) | seqan3::views::minimiser(5);
//![minimiser]
}
{
//![minimiser_seed]
//![def]
uint64_t const seed = 0x8F'3F'73'B5'CF'1C'9A'DE;
auto minimisers = text | seqan3::views::kmer_hash(seqan3::ungapped{4})
| std::views::transform(
[](uint64_t i)
{
return i ^ seed;
})
| seqan3::views::minimiser(5);
//![minimiser_seed]
}
}
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