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// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
// SPDX-License-Identifier: CC0-1.0
#include <seqan3/test/snippet/create_temporary_snippet_file.hpp>
seqan3::test::create_temporary_snippet_file my_fastq{"my.fastq",
R"////![fastq_file]"}; // std::filesystem::current_path() / "my.fastq" will be deleted after the execution
//![solution]
#include <filesystem>
//![include_debug_stream]
#include <seqan3/core/debug_stream.hpp>
//![include_debug_stream]
#include <seqan3/io/sequence_file/all.hpp>
int main()
{
std::filesystem::path current_path = std::filesystem::current_path();
seqan3::sequence_file_input fin{current_path / "my.fastq"};
for (auto & rec : fin)
{
seqan3::debug_stream << "ID: " << rec.id() << '\n';
seqan3::debug_stream << "SEQ: " << rec.sequence() << '\n';
seqan3::debug_stream << "QUAL: " << rec.base_qualities() << '\n';
}
}
//![solution]
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