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test dataset app time_mean time_stdev mem_mean mem_stdev
A) Reverse complement dataset_A.fa biogo 107.73 1.35 31496 841
A) Reverse complement dataset_A.fa fasta_utilities 16.91 0.28 52022 544
A) Reverse complement dataset_A.fa seqkit 10.93 0.58 44082 122
A) Reverse complement dataset_A.fa seqmagick 57.15 0.23 50841 1385
A) Reverse complement dataset_A.fa seqtk 8.90 0.12 7533 37
A) Reverse complement dataset_B.fa biogo 94.75 0.36 1325084 68795
A) Reverse complement dataset_B.fa fasta_utilities 24.02 0.37 1255725 62
A) Reverse complement dataset_B.fa seqkit 9.90 0.37 785510 115
A) Reverse complement dataset_B.fa seqmagick 64.00 0.29 1384210 89700
A) Reverse complement dataset_B.fa seqtk 9.63 0.06 244844 23
B) Searching by ID list dataset_A.fa fasta_utilities 9.65 0.11 52265 494
B) Searching by ID list dataset_A.fa seqkit 2.88 0.01 39518 114
B) Searching by ID list dataset_A.fa seqmagick 38.57 0.57 38998 1332
B) Searching by ID list dataset_A.fa seqtk 10.73 0.06 9901 1
B) Searching by ID list dataset_B.fa fasta_utilities 12.19 0.13 1255814 7
B) Searching by ID list dataset_B.fa seqkit 3.53 0.06 785308 122
B) Searching by ID list dataset_B.fa seqmagick 42.77 0.29 977886 69
B) Searching by ID list dataset_B.fa seqtk 13.02 0.10 244820 67
B) Searching by ID list dataset_C.fq fasta_utilities 86.42 2.58 77085 87
B) Searching by ID list dataset_C.fq seqkit 8.26 0.02 70129 905
B) Searching by ID list dataset_C.fq seqmagick 237.81 6.33 52580 76
B) Searching by ID list dataset_C.fq seqtk 6.16 0.12 39950 19
C) Sampling by number dataset_A.fa seqkit 4.41 0.00 48637 150
C) Sampling by number dataset_A.fa seqmagick 36.07 0.03 543650 5879
C) Sampling by number dataset_A.fa seqtk 6.91 0.05 7848 5
C) Sampling by number dataset_B.fa seqkit 5.61 0.06 1056598 502
C) Sampling by number dataset_B.fa seqmagick 41.12 0.93 2974184 56454
C) Sampling by number dataset_B.fa seqtk 7.43 0.06 244845 26
C) Sampling by number dataset_C.fq seqkit 10.07 0.14 13810 97
C) Sampling by number dataset_C.fq seqmagick 279.13 1.58 3741257 107
C) Sampling by number dataset_C.fq seqtk 7.72 0.06 24022 3707
D) Removing duplicates by seq dataset_A.fa seqkit 10.19 0.24 45918 128
D) Removing duplicates by seq dataset_A.fa seqmagick 49.98 0.48 54606 472
D) Removing duplicates by seq dataset_B.fa seqkit 11.12 0.29 785329 166
D) Removing duplicates by seq dataset_B.fa seqmagick 62.16 1.22 1033625 83
D) Removing duplicates by seq dataset_C.fq seqkit 40.22 0.18 1656700 152410
D) Removing duplicates by seq dataset_C.fq seqmagick 469.96 12.62 2737658 60
E) Subsequence with BED file dataset_B.fa seqkit 7.27 0.17 2218930 97457
E) Subsequence with BED file dataset_B.fa seqtk 6.42 0.11 246216 53
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