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|
#!/bin/bash
set -e
pkg=seqkit
if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
fi
cp -Rf /usr/share/doc/${pkg}-examples/* "${AUTOPKGTEST_TMP}"
cd "${AUTOPKGTEST_TMP}"
gunzip -r *
cd tests
sed -i '/bundler_stats_merged/d' test.sh
sed -i '/csvtk/d' test.sh
sed -i '/CSVTK/d' test.sh
sed -i 's/app=.*/app=seqkit/g' test.sh
sed -i '/corr.*tsv/d' test.sh
sed -i '/cd seqkit/d' test.sh
cd ..
hostarch=$(dpkg-architecture -qDEB_HOST_ARCH)
if [ "$hostarch" = "s390x" -o "$hostarch" = "ppc64el" ] ; then
bash ./tests/test.sh || true
else
bash ./tests/test.sh
fi
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