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#!/usr/bin/env python
import os
import sys
import subprocess
from setuptools import setup, find_packages
subprocess.call(
('mkdir -p seqmagick/data && '
'git describe --tags --dirty > seqmagick/data/ver.tmp '
'&& mv seqmagick/data/ver.tmp seqmagick/data/ver '
'|| rm -f seqmagick/data/ver.tmp'),
shell=True, stderr=open(os.devnull, "w"))
# must import __version__ after call to 'git describe' above
from seqmagick import __version__
setup(name='seqmagick',
version=__version__,
description='Tools for converting and modifying sequence files '
'from the command-line',
url='http://github.com/fhcrc/seqmagick',
download_url='http://pypi.python.org/pypi/seqmagick',
author='Matsen Group',
# author_email='http://matsen.fhcrc.org/',
packages=find_packages(),
entry_points={
'console_scripts': [
'seqmagick = seqmagick.scripts.cli:main'
]},
package_data={
'seqmagick': ['data/*'],
'seqmagick.test.integration': ['data/*']
},
setup_requires=['pytest>=6.0'],
python_requires='>=3.5',
test_suite='pytest.collect',
install_requires=['biopython>=1.78', 'pygtrie>=2.1'],
classifiers=[
'License :: OSI Approved :: GNU General Public License (GPL)',
'Development Status :: 4 - Beta',
'Programming Language :: Python :: 3.5',
'Programming Language :: Python :: 3.6',
'Programming Language :: Python :: 3.7',
'Programming Language :: Python :: 3.8',
'Topic :: Scientific/Engineering :: Bio-Informatics',
],
license="GPL V3")
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