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#!/usr/bin/python3
import os
import shutil
import sys
def parseArguments():
# Get from the arguments the list of input fasta files and check that they all exist.
helpMessage = "This script copies a run to directory DataOnDisk."
if not len(sys.argv)==1:
print(helpMessage)
exit(1)
def saveRun(parentDirectory=""):
dataPath = os.path.abspath(os.path.join(parentDirectory, "Data"))
dataOnDiskPath = os.path.abspath(os.path.join(parentDirectory, "DataOnDisk"))
if not os.path.lexists(dataPath):
raise Exception('Data does not exist.')
if os.path.lexists(dataOnDiskPath):
raise Exception('DataOnDisk already exists. Remove before running this script.')
shutil.copytree('Data', 'DataOnDisk')
def main():
parseArguments()
saveRun()
if __name__ == "__main__":
main()
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