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from tools.load import LoadMatrix
from sg import sg
lm=LoadMatrix()
traindna=lm.load_dna('../data/fm_train_dna.dat')
testdna=lm.load_dna('../data/fm_test_dna.dat')
parameter_list=[[traindna,testdna,10,20],
[traindna,testdna,11,21]]
def kernel_weighteddegreestring (fm_train_dna=traindna,fm_test_dna=testdna,
size_cache=10,degree=20):
sg('set_features', 'TRAIN', fm_train_dna, 'DNA')
sg('set_features', 'TEST', fm_test_dna, 'DNA')
sg('set_kernel', 'WEIGHTEDDEGREE', 'CHAR', size_cache, degree)
km=sg('get_kernel_matrix', 'TRAIN')
km=sg('get_kernel_matrix', 'TEST')
return km
if __name__=='__main__':
print('WeightedDegreeString')
kernel_weighteddegreestring(*parameter_list[0])
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