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/************************************************************************
*
* Copyright (C) 2009-2024 IRCAD France
* Copyright (C) 2012-2021 IHU Strasbourg
*
* This file is part of Sight.
*
* Sight is free software: you can redistribute it and/or modify it under
* the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* Sight is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with Sight. If not, see <https://www.gnu.org/licenses/>.
*
***********************************************************************/
#pragma once
#include "data/color.hpp"
#include "data/factory/new.hpp"
#include "data/object.hpp"
namespace sight::data
{
/**
* @brief This class defines structure traits.
*
* A structure traits contains :
* - [required] a type (ie. Skin, Liver, ...)
* - [required] a category (or more) : Body, Head, Neck, Thorax, Abdomen, Pelvis, Arm, Leg, Liver_segments, Other
* - [required] a class : Tool, Environment, Vessel, Lesion, Organ, Functional, No_constraint
* - [required] a color
* - [optional] an attachment only if class is LESION or FUNCTIONAL
* - [optional] a native ROI expression : ex. inter(world(type(Skin)),not(class(Organ)))
* - [optional] a native geometric ROI expression
*/
class SIGHT_DATA_CLASS_API structure_traits final : public object
{
public:
SIGHT_DECLARE_CLASS(structure_traits, object);
/// Defines structure categories
enum category
{
body,
head,
neck,
thorax,
abdomen,
pelvis,
arm,
leg,
liver_segments,
other
};
using category_container_t = std::vector<category>;
using roi_expression_t = std::string;
/// Defines structure class
enum structure_class
{
tool,
environment,
vessel,
lesion,
organ,
functional,
no_constraint
};
/**
* @brief Constructor
*/
SIGHT_DATA_API structure_traits();
/// Destructor. Does nothing.
SIGHT_DATA_API ~structure_traits() noexcept override = default;
/**
* @{
* @brief Get/Set value of the structure type.
*/
std::string type();
const std::string& type() const;
void set_type(const std::string& _type);
/// @}
/**
* @{
* @brief Get/Set value of the categories.
*/
category_container_t get_categories();
const category_container_t& get_categories() const;
void set_categories(const category_container_t& _categories);
/// @}
/**
* @{
* @brief Get/Set value of the class.
*/
structure_class get_class();
const structure_class& get_class() const;
void set_class(const structure_class& _class);
/// @}
/**
* @{
* @brief Get/Set value of the nativeExp.
*/
roi_expression_t get_native_exp();
const roi_expression_t& get_native_exp() const;
void set_native_exp(const roi_expression_t& _native_exp);
/// @}
/**
* @{
* @brief Get/Set value of the nativeGeometricExp.
*/
roi_expression_t get_native_geometric_exp();
const roi_expression_t& get_native_geometric_exp() const;
void set_native_geometric_exp(const roi_expression_t& _native_geometric_exp);
/// @}
/**
* @{
* @brief Get/Set value of the attachmentType.
*/
std::string get_attachment_type();
const std::string& get_attachment_type() const;
void set_attachment_type(const std::string& _attachment_type);
/// @}
/**
* @{
* @brief Get/Set value of the color.
*/
color::sptr get_color();
color::csptr get_color() const;
void set_color(const color::sptr& _color);
/// @}
/**
* @{
* @brief Get/Set value of the anatomicRegion.
*/
std::string get_anatomic_region();
const std::string& get_anatomic_region() const;
void set_anatomic_region(const std::string& _anatomic_region);
/// @}
/**
* @{
* @brief Get/Set value of the propertyCategory.
*/
std::string get_property_category();
const std::string& get_property_category() const;
void set_property_category(const std::string& _property_category);
/// @}
/**
* @{
* @brief Get/Set value of the propertyType.
*/
std::string get_property_type();
const std::string& get_property_type() const;
void set_property_type(const std::string& _property_type);
/// @}
/// Equality comparison operators
/// @{
SIGHT_DATA_API bool operator==(const structure_traits& _other) const noexcept;
SIGHT_DATA_API bool operator!=(const structure_traits& _other) const noexcept;
/// @}
/// Defines shallow copy
/// @throws data::exception if an errors occurs during copy
/// @param[in] _source the source object to copy
SIGHT_DATA_API void shallow_copy(const object::csptr& _source) override;
/// Defines deep copy
/// @throws data::exception if an errors occurs during copy
/// @param _source source object to copy
/// @param _cache cache used to deduplicate pointers
SIGHT_DATA_API void deep_copy(
const object::csptr& _source,
const std::unique_ptr<deep_copy_cache_t>& _cache = std::make_unique<deep_copy_cache_t>()
) override;
private:
/// structure type (ie. Liver, Skin, ...)
std::string m_type;
/// structure categories (ie. abdomen, body, ...)
category_container_t m_categories;
/// structure default color
color::sptr m_color;
/// structure class (TOOL, ENVIRONMENT, VESSEL, LESION, ORGAN, FUNCTIONAL, NO_CONSTRAINT)
structure_class m_class {no_constraint};
/// native ROI expression (can be empty)
roi_expression_t m_native_exp;
/// native geometric ROI expression
roi_expression_t m_native_geometric_exp;
/// structure attachment type if class is LESION or FUNCTIONAL (can be empty)
std::string m_attachment_type;
/// Dicom designation of Anatomic region if unknown it must be set to "ToDefine"
std::string m_anatomic_region;
/// Dicom property category of organ if unknown it must be set to "ToDefine"
std::string m_property_category;
/// Dicom property type of organ if unknown it must be set to "ToDefine"
std::string m_property_type;
};
//-----------------------------------------------------------------------------
inline std::string structure_traits::type()
{
return m_type;
}
//-----------------------------------------------------------------------------
inline const std::string& structure_traits::type() const
{
return m_type;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_type(const std::string& _type)
{
m_type = _type;
}
//-----------------------------------------------------------------------------
inline structure_traits::category_container_t structure_traits::get_categories()
{
return m_categories;
}
//-----------------------------------------------------------------------------
inline const structure_traits::category_container_t& structure_traits::get_categories() const
{
return m_categories;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_categories(const structure_traits::category_container_t& _categories)
{
m_categories = _categories;
}
//-----------------------------------------------------------------------------
inline structure_traits::structure_class structure_traits::get_class()
{
return m_class;
}
//-----------------------------------------------------------------------------
inline const structure_traits::structure_class& structure_traits::get_class() const
{
return m_class;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_class(const structure_traits::structure_class& _class)
{
m_class = _class;
}
//-----------------------------------------------------------------------------
inline structure_traits::roi_expression_t structure_traits::get_native_exp()
{
return m_native_exp;
}
//-----------------------------------------------------------------------------
inline const structure_traits::roi_expression_t& structure_traits::get_native_exp() const
{
return m_native_exp;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_native_exp(const structure_traits::roi_expression_t& _native_exp)
{
m_native_exp = _native_exp;
}
//-----------------------------------------------------------------------------
inline structure_traits::roi_expression_t structure_traits::get_native_geometric_exp()
{
return m_native_geometric_exp;
}
//-----------------------------------------------------------------------------
inline const structure_traits::roi_expression_t& structure_traits::get_native_geometric_exp() const
{
return m_native_geometric_exp;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_native_geometric_exp(const structure_traits::roi_expression_t& _native_geometric_exp)
{
m_native_geometric_exp = _native_geometric_exp;
}
//-----------------------------------------------------------------------------
inline std::string structure_traits::get_attachment_type()
{
return m_attachment_type;
}
//-----------------------------------------------------------------------------
inline const std::string& structure_traits::get_attachment_type() const
{
return m_attachment_type;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_attachment_type(const std::string& _attachment_type)
{
m_attachment_type = _attachment_type;
}
//-----------------------------------------------------------------------------
inline color::sptr structure_traits::get_color()
{
return m_color;
}
//-----------------------------------------------------------------------------
inline color::csptr structure_traits::get_color() const
{
return m_color;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_color(const color::sptr& _color)
{
m_color = _color;
}
//-----------------------------------------------------------------------------
inline std::string structure_traits::get_anatomic_region()
{
return m_anatomic_region;
}
//-----------------------------------------------------------------------------
inline const std::string& structure_traits::get_anatomic_region() const
{
return m_anatomic_region;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_anatomic_region(const std::string& _anatomic_region)
{
m_anatomic_region = _anatomic_region;
}
//-----------------------------------------------------------------------------
inline std::string structure_traits::get_property_category()
{
return m_property_category;
}
//-----------------------------------------------------------------------------
inline const std::string& structure_traits::get_property_category() const
{
return m_property_category;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_property_category(const std::string& _property_category)
{
m_property_category = _property_category;
}
//-----------------------------------------------------------------------------
inline std::string structure_traits::get_property_type()
{
return m_property_type;
}
//-----------------------------------------------------------------------------
inline const std::string& structure_traits::get_property_type() const
{
return m_property_type;
}
//-----------------------------------------------------------------------------
inline void structure_traits::set_property_type(const std::string& _property_type)
{
m_property_type = _property_type;
}
//-----------------------------------------------------------------------------
} // namespace sight::data
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