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/************************************************************************
*
* Copyright (C) 2009-2024 IRCAD France
* Copyright (C) 2012-2020 IHU Strasbourg
*
* This file is part of Sight.
*
* Sight is free software: you can redistribute it and/or modify it under
* the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* Sight is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with Sight. If not, see <https://www.gnu.org/licenses/>.
*
***********************************************************************/
#include "utest_data/generator/series_set.hpp"
#include "utest_data/generator/image.hpp"
#include "utest_data/generator/mesh.hpp"
#include <core/tools/random/generator.hpp>
#include <core/type.hpp>
#include <data/activity.hpp>
#include <data/image.hpp>
#include <data/image_series.hpp>
#include <data/map.hpp>
#include <data/material.hpp>
#include <data/mesh.hpp>
#include <data/model_series.hpp>
#include <data/reconstruction.hpp>
#include <data/series.hpp>
#include <data/series_set.hpp>
#include <data/string.hpp>
#include <sstream>
namespace sight::utest_data::generator
{
using core::tools::random::safe_rand;
//------------------------------------------------------------------------------
data::series_set::sptr series_set::create_series_set(
const unsigned char _nb_img_series,
const unsigned char _nb_model_series
)
{
auto series_set = std::make_shared<data::series_set>();
for(unsigned char nb = 0 ; nb < _nb_img_series ; ++nb)
{
data::series::sptr img_series;
img_series = series_set::create_image_series();
series_set->push_back(img_series);
}
for(unsigned char nb = 0 ; nb < _nb_model_series ; ++nb)
{
data::series::sptr model_series;
model_series = series_set::create_model_series(static_cast<unsigned char>(safe_rand() % 5 + 1));
series_set->push_back(model_series);
}
return series_set;
}
//------------------------------------------------------------------------------
void series_set::generate_series_information(data::series::sptr _series)
{
static unsigned int count = 1;
std::stringstream str;
str.width(4);
str.fill('0');
str << count++;
const std::string uid = "1.2.826.0.1.3680043.2.1125.102906542887009256605006409108689" + str.str();
const auto modality = data::dicom::modality_t::ct;
const std::string date = "20130418";
const std::string time = "101010.101010";
const std::string description = "Description";
data::dicom_values_t performing_physician_name;
_series->set_performing_physician_name(
"Adams^John Robert Quincy^^Rev.^B.A. M.Div.\\Morrison-Jones^Susan^^^Ph.D., Chief Executive Officer\\Doe^John"
);
_series->set_series_instance_uid(uid);
_series->set_modality(modality);
_series->set_series_date(date);
_series->set_series_time(time);
_series->set_series_description(description);
const std::string institution = "IRCAD";
_series->set_institution_name(institution);
const std::string patient_name = "NomSeriesSet1";
const std::string patient_firstname = "PrenomSeriesSet1";
const std::string patient_id = "4564383757";
const std::string patient_birthdate = "19710418";
const std::string patient_sex = "O ";
_series->set_patient_name((patient_name + "^") + patient_firstname);
_series->set_patient_id(patient_id);
_series->set_patient_birth_date(patient_birthdate);
_series->set_patient_sex(patient_sex);
// studies informations
const std::string study_uid = "1.2.826.0.1.3680043.2.1125.44278200849347599055201494082232" + str.str();
const std::string study_date = "20130418";
const std::string study_time = "095948.689872";
const std::string study_physician = "Dr^Jekyl";
const std::string study_description = "Say 33.";
const std::string patient_age = "042Y";
_series->set_study_instance_uid(study_uid);
_series->set_study_date(study_date);
_series->set_study_time(study_time);
_series->set_referring_physician_name(study_physician);
_series->set_study_description(study_description);
_series->set_patient_age(patient_age);
}
//------------------------------------------------------------------------------
data::image_series::sptr series_set::create_image_series()
{
data::image_series::sptr img_series = std::make_shared<data::image_series>();
series_set::generate_series_information(img_series);
image::generate_random_image(img_series, core::type::INT16);
return img_series;
}
//------------------------------------------------------------------------------
data::model_series::sptr series_set::create_model_series(unsigned char _nb_reconstruction)
{
data::model_series::sptr model_series = std::make_shared<data::model_series>();
series_set::generate_series_information(model_series);
data::model_series::reconstruction_vector_t rec_db;
for(unsigned char nb = 0 ; nb < _nb_reconstruction ; ++nb)
{
data::reconstruction::sptr rec = std::make_shared<data::reconstruction>();
// Generates reconstruction with a prefixed index in organName "0_Liver", "1_Liver", ...
series_set::generate_reconstruction(rec, static_cast<int>(nb));
rec_db.push_back(rec);
}
model_series->set_reconstruction_db(rec_db);
return model_series;
}
//------------------------------------------------------------------------------
data::activity::sptr series_set::create_activity()
{
data::activity::sptr activity = std::make_shared<data::activity>();
const std::string config_id = "IdOfTheConfig";
activity->set_activity_config_id(config_id);
(*activity)["key1"] = std::make_shared<data::string>("ValueOfKey1");
return activity;
}
//------------------------------------------------------------------------------
void series_set::generate_reconstruction(data::reconstruction::sptr _rec, int _index)
{
_rec->set_is_visible(true);
const std::string name = "Liver";
std::string organ_name;
//If needed, prefix organ name by the number of the reconstruction, to ensure the same reading order for tests.
if(_index > -1)
{
organ_name = std::to_string(_index) + "_" + name;
}
else
{
organ_name = name;
}
_rec->set_organ_name(organ_name);
_rec->set_structure_type("Liver");
data::image::sptr img = std::make_shared<data::image>();
image::generate_random_image(img, core::type::UINT16);
_rec->set_image(img);
data::material::sptr material = std::make_shared<data::material>();
material->ambient()->red() = 0.75F;
material->ambient()->green() = 0.10F;
material->ambient()->blue() = 0.56F;
material->ambient()->alpha() = 0.8F;
material->diffuse()->red() = 0.85F;
material->diffuse()->green() = 0.20F;
material->diffuse()->blue() = 0.66F;
material->diffuse()->alpha() = 0.9F;
_rec->set_material(material);
data::mesh::sptr mesh = std::make_shared<data::mesh>();
mesh::generate_mesh(mesh);
_rec->set_mesh(mesh);
}
} // namespace sight::utest_data::generator
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