File: control

package info (click to toggle)
sigma-align 1.1.1-3
  • links: PTS, VCS
  • area: main
  • in suites: lenny
  • size: 620 kB
  • ctags: 99
  • sloc: sh: 3,403; ansic: 1,344; xml: 221; makefile: 56
file content (26 lines) | stat: -rw-r--r-- 1,299 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
Source: sigma-align
Section: science
Priority: optional
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Charles Plessy <charles-debian-nospam@plessy.org>,
 Andreas Tille <tille@debian.org>
Build-Depends: debhelper (>= 5), libglib2.0-dev
Standards-Version: 3.7.3
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/sigma-align/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/sigma-align/trunk/
Homepage: http://www.imsc.res.in/~rsidd/sigma/

Package: sigma-align
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: Simple greedy multiple alignment of non-coding DNA sequences
 Sigma ("Simple greedy multiple alignment") is an alignment program with a new
 algorithm and scoring scheme designed specifically for non-coding DNA
 sequence. It uses a strategy of seeking the best possible gapless local
 alignments, at each step making the best possible alignment consistent with
 existing alignments, and scores the significance of the alignment based on the
 lengths of the aligned fragments and a background model which may be supplied
 or estimated from an auxiliary file of intergenic DNA.
 .
 Sigma has been published in BMC Bioinformatics. 2006 Mar 16;7:143.