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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.8.
.TH SIMKAMINCORE "1" "September 2019" "simkaMinCore 1.5.1" "User Commands"
.SH NAME
simkaMinCore \- comparative metagenomics method dedicated to NGS datasets
.SH SYNOPSIS
.B simkaMin
[\fI\,option\/\fR]
.SH DESCRIPTION
[Distance computation options]
.TP
sketch
: transform datasets in small sketches of k\-mers and their abundance
.TP
distance
: compute Jaccard and Bray\-Curtis distances between sketches
.PP
[Distance matrix manipulation options]
.TP
export
: export distance matrices stored in binary format
.PP
[Sketch options]
.TP
append
: merge multiple sketch files into a single one
.TP
info
: list datasets contained in a sketch file
.SH AUTHOR
This manpage was written by Shayan Doust for the Debian distribution and can be used for any other usage of the program.
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