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#ifndef INCLUDED_MODBASE_
#define INCLUDED_MODBASE_
// see ../modalities/README
#include <iomanip>
#include <unordered_map>
#include "../err/err.h"
#include "../typedefs/typedefs.h"
#include "../agegroupvsd/agegroupvsd.h"
class ModBase
{
friend std::ostream &operator<<(std::ostream &, ModBase const &);
StringVect d_base;
std::string const d_id;
bool d_defined;
size_t d_cost = 0; // cost of using th modality
SizeVect d_count;
SizeVect d_truePositives; // separate counts for each
SizeVect d_falsePositives; // round
SizeVect d_trueNegatives;
SizeVect d_falseNegatives;
public:
ModBase(std::string const &id);
virtual ~ModBase();
size_t cost() const; // .f
void count(size_t round); // .f
bool defined() const; // .f
double dose(uint16_t idx) const; // .f
void addTruePositive(size_t round); // .f
void addFalsePositive(size_t round); // .f
void addTrueNegative(size_t round); // .f
void addFalseNegative(size_t round); // .f
size_t truePositive(size_t round) const; // .f
size_t falsePositive(size_t round) const; // .f
size_t trueNegative(size_t round) const; // .f
size_t falseNegative(size_t round) const; // .f
std::string const &id() const; // .f
size_t operator[](size_t round) const; // .f
void resetCounters(size_t nRounds);
double sensitivity(size_t idx) const; // .f
double specificity(double age) const; // .f
void vary(std::ostream &out); // see Growth::vary() // .f
protected:
StringVect &base(); // .f
void doseBase(VSDvect &dose);
void extractBase(VSD &dest); // used by MRI and CT
// ageGroup and specificity
// sets keywords: [2]: Specificity
// [3]: ageGroup
void specificityBase(AgeGroupVSDvect &dest);
private:
// vDose members return 0
virtual VSDvect const *vDose() const; // 1
virtual double vDose(uint16_t idx) const; // 2
virtual void vInsert(std::ostream &out) const = 0;
virtual double vSensitivity(size_t idx) const = 0;
virtual double vSpecificity(double age) const = 0;
virtual void vVary(std::ostream &out) = 0;
static void outSpec(std::ostream &out, char const *prefix,
unsigned fill, AgeGroupVSD const &spec);
};
// protected void costBase(StringVect &keywords); sets d_cost from "costs:"
#include "modbase.f"
#endif
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