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#!/usr/bin/python3
#
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# SLEPc - Scalable Library for Eigenvalue Problem Computations
# Copyright (c) 2002-2020, Universitat Politecnica de Valencia, Spain
#
# This file is part of SLEPc.
# SLEPc is distributed under a 2-clause BSD license (see LICENSE).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
#
from __future__ import print_function
import os, sys, time, shutil
def AddDefine(conffile,name,value,prefix='SLEPC_'):
conffile.write('#define '+prefix+name+' "'+value+'"\n')
def WriteModulesFile(modules,version,sdir):
''' Write the contents of the Modules file '''
modules.write('#%Module\n\n')
modules.write('proc ModulesHelp { } {\n')
modules.write(' puts stderr "This module sets the path and environment variables for slepc-%s"\n' % version)
modules.write(' puts stderr " see https://slepc.upv.es/ for more information"\n')
modules.write(' puts stderr ""\n}\n')
modules.write('module-whatis "SLEPc - Scalable Library for Eigenvalue Problem Computations"\n\n')
modules.write('module load petsc\n')
modules.write('set slepc_dir %s\n' % sdir)
modules.write('setenv SLEPC_DIR $slepc_dir\n')
def WritePkgconfigFile(pkgconfig,version,pversion,sdir,isinstall,prefixdir,singlelib):
''' Write the contents of the pkg-config file '''
slepc64Ext = '64' if ('64' in slepc.slepcLibExt) else ''
pkgconfig.write('prefix=%s\n' % prefixdir)
pkgconfig.write('exec_prefix=${prefix}\n')
pkgconfig.write('includedir=${prefix}/include\n')
pkgconfig.write('libdir=${prefix}/lib\n\n')
pkgconfig.write('Name: SLEPc{}\n'.format(slepc64Ext) )
pkgconfig.write('Description: the Scalable Library for Eigenvalue Problem Computations\n')
pkgconfig.write('Version: %s\n' % version)
pkgconfig.write('Requires: PETSc{} >= {:s}\n'.format(slepc64Ext, pversion))
pkgconfig.write('Cflags: -I${includedir}')
if not isinstall:
pkgconfig.write(' -I'+os.path.join(sdir,'include'))
pkgconfig.write('\nLibs:')
if singlelib:
pkgconfig.write(' -L${libdir} -lslepc%s\n' % (slepc.slepcLibExt) )
else:
pkgconfig.write(' -L${{libdir}} -lslepcnep{0} -lslepcpep{0} -lslepcsvd{0} -lslepceps{0} -lslepcmfn{0} -lslepclme{0} -lslepcsys{0}\n'.format(slepc.slepcLibExt))
def WriteReconfigScript(reconfig,slepcdir,usedargs):
''' Write the contents of the reconfigure script '''
reconfig.write('#!/usr/bin/env python\n\n')
reconfig.write('import os, sys\n')
if usedargs:
reconfig.write('sys.argv.extend(\''+usedargs+'\'.split())\n')
reconfig.write('execfile(os.path.join(\''+slepcdir+'\',\'config\',\'configure.py\'))\n')
# Use en_US as language so that compiler messages are in English
def fixLang(lang):
if lang in os.environ and os.environ[lang] != '':
lv = os.environ[lang]
enc = ''
try: lv,enc = lv.split('.')
except: pass
if lv not in ['en_US','C']: lv = 'en_US'
if enc: lv = lv+'.'+enc
os.environ[lang] = lv
fixLang('LC_LOCAL')
fixLang('LANG')
# Set python path
configdir = os.path.abspath('config')
if not os.path.isdir(configdir):
sys.exit('ERROR: Run configure from $SLEPC_DIR, not '+os.path.abspath('.'))
sys.path.insert(0,configdir)
sys.path.insert(0,os.path.join(configdir,'packages'))
# Load auxiliary classes
import argdb, log
argdb = argdb.ArgDB(sys.argv)
log = log.Log()
showhelp = argdb.PopHelp()
# Load main classes, process the corresponding command-line options
import slepc, petsc
slepc = slepc.SLEPc(argdb,log)
petsc = petsc.PETSc(argdb,log)
# Check enviroment and PETSc version
if not showhelp:
log.Print('Checking environment...')
petsc.InitDir(slepc.prefixdir)
petsc.LoadVersion()
slepc.InitDir()
slepc.LoadVersion()
# Load PETSc configuration
if not showhelp:
petsc.LoadConf()
packagesinpetsc = petsc.packages
else:
packagesinpetsc = ''
# Load classes for packages and process their command-line options
import arpack, blopex, blzpack, elemental, elpa, feast, hpddm, primme, scalapack, slepc4py, slicot, trlan, sowing, lapack
arpack = arpack.Arpack(argdb,log)
blopex = blopex.Blopex(argdb,log)
blzpack = blzpack.Blzpack(argdb,log)
elemental = elemental.Elemental(argdb,log,packagesinpetsc)
elpa = elpa.Elpa(argdb,log)
feast = feast.Feast(argdb,log,packagesinpetsc)
primme = primme.Primme(argdb,log)
trlan = trlan.Trlan(argdb,log)
sowing = sowing.Sowing(argdb,log)
lapack = lapack.Lapack(argdb,log)
scalapack = scalapack.Scalapack(argdb,log,packagesinpetsc)
slepc4py = slepc4py.Slepc4py(argdb,log)
slicot = slicot.Slicot(argdb,log)
hpddm = hpddm.HPDDM(argdb,log)
externalpackages = [arpack, blopex, blzpack, elpa, hpddm, primme, slicot, slepc4py, trlan]
petscpackages = [lapack, elemental, feast, scalapack]
checkpackages = petscpackages + externalpackages
# Print help if requested and check for wrong command-line options
if showhelp:
print('\nConfiguration script for SLEPc '+slepc.version)
print('\nUsage: ./configure [OPTION]...\n')
print(' Brackets indicate an optional part')
print(' <bool> means a boolean, use either 0 or 1')
print(' <dir> means a directory')
print(' <fname> means a file name, can also include the full path or url')
print(' <libraries> means a comma-separated list of libraries, e.g., --with-arpack-lib=-lparpack,-larpack')
print(' <flags> means a string of flags, e.g., --download-primme-cflags="-std=c99 -g"')
slepc.ShowHelp()
sowing.ShowHelp()
print('\nOptional packages via PETSc (these are tested by default if present in PETSc\'s configuration):\n')
for pkg in petscpackages:
pkg.ShowHelp()
print('\nOptional packages (external):\n')
for pkg in externalpackages:
pkg.ShowHelp()
print('')
sys.exit(0)
argdb.ErrorPetscOptions()
argdb.ErrorIfNotEmpty()
# Check if packages-download directory contains requested packages
if slepc.downloaddir:
l = list(filter(None, [pkg.MissingTarball(slepc.downloaddir) for pkg in externalpackages + [sowing]]))
if l:
log.Println('\n\nDownload the following packages and run the script again:')
for pkg in l: log.Println(pkg)
log.Exit('Missing files in packages-download directory')
# Check for empty PETSC_ARCH
emptyarch = not ('PETSC_ARCH' in os.environ and os.environ['PETSC_ARCH'])
if emptyarch:
pseudoarch = 'arch-' + sys.platform.replace('cygwin','mswin')+ '-' + petsc.language.lower().replace('+','x')
if petsc.debug:
pseudoarch += '-debug'
else:
pseudoarch += '-opt'
if not 'real' in petsc.scalar:
pseudoarch += '-' + petsc.scalar
if slepc.buildsuffix:
pseudoarch += '-' + slepc.buildsuffix
archname = 'installed-'+pseudoarch.replace('linux-','linux2-')
else:
archname = petsc.arch
# Create directories for configuration files
archdir, archdirexisted = slepc.CreateDirTest(slepc.dir,archname)
libdir = slepc.CreateDir(archdir,'lib')
confdir = slepc.CreateDirTwo(libdir,'slepc','conf')
# Open log file
log.Open(slepc.dir,confdir,'configure.log')
log.write('='*80)
log.write('Starting Configure Run at '+time.ctime(time.time()))
log.write('Configure Options: '+' '.join(sys.argv[1:]))
log.write('Working directory: '+os.getcwd())
log.write('Python version:\n'+sys.version)
log.write('make: '+petsc.make)
# Some checks related to PETSc configuration
if petsc.nversion < slepc.nversion:
log.Exit('This SLEPc version is not compatible with PETSc version '+petsc.version)
if not petsc.precision in ['double','single','__float128']:
log.Exit('This SLEPc version does not work with '+petsc.precision+' precision')
# Display versions and paths
log.write('PETSc source directory: '+petsc.dir)
log.write('PETSc install directory: '+petsc.prefixdir)
log.write('PETSc version: '+petsc.lversion)
if not emptyarch:
log.write('PETSc architecture: '+petsc.arch)
log.write('SLEPc source directory: '+slepc.dir)
if slepc.isinstall:
log.write('SLEPc install directory: '+slepc.prefixdir)
log.write('SLEPc version: '+slepc.lversion)
# Clean previous configuration if needed
if archdirexisted:
if slepc.isinstall and not slepc.clean:
log.Exit('You are requesting a prefix install but the arch directory '+archdir+' already exists and may contain files from previous builds; consider adding option --with-clean')
if slepc.clean:
log.Println('\nCleaning arch dir '+archdir+'...')
try:
for root, dirs, files in os.walk(archdir,topdown=False):
for name in files:
if name!='configure.log':
os.remove(os.path.join(root,name))
except:
log.Exit('Cannot remove existing files in '+archdir)
for rdir in ['obj','externalpackages']:
try:
shutil.rmtree(os.path.join(archdir,rdir))
except: pass
# Create other directories and configuration files
if not slepc.prefixdir:
slepc.prefixdir = archdir
includedir = slepc.CreateDir(archdir,'include')
modulesdir = slepc.CreateDirTwo(confdir,'modules','slepc')
pkgconfdir = slepc.CreateDir(libdir,'pkgconfig')
slepcvars = slepc.CreateFile(confdir,'slepcvariables')
slepcrules = slepc.CreateFile(confdir,'slepcrules')
slepcconf = slepc.CreateFile(includedir,'slepcconf.h')
pkgconfig = slepc.CreateFile(pkgconfdir,'slepc.pc')
if slepc.isinstall:
modules = slepc.CreateFile(modulesdir,slepc.lversion)
else:
modules = slepc.CreateFile(modulesdir,slepc.lversion+'-'+archname)
reconfig = slepc.CreateFile(confdir,'reconfigure-'+archname+'.py')
reconfigpath = os.path.join(confdir,'reconfigure-'+archname+'.py')
# Write initial part of file slepcvariables
slepcvars.write('SLEPC_CONFIGURE_OPTIONS = '+argdb.UsedArgs()+'\n')
slepcvars.write('SLEPC_INSTALLDIR = '+slepc.prefixdir+'\n')
if emptyarch:
slepcvars.write('INSTALLED_PETSC = 1\n')
if slepc.datadir:
slepcvars.write('DATAFILESPATH = '+slepc.datadir+'\n')
# Write initial part of file slepcconf.h
slepcconf.write('#if !defined(SLEPCCONF_H)\n')
slepcconf.write('#define SLEPCCONF_H\n\n')
AddDefine(slepcconf,'PETSC_DIR',petsc.dir)
AddDefine(slepcconf,'PETSC_ARCH',petsc.arch)
AddDefine(slepcconf,'DIR',slepc.dir)
AddDefine(slepcconf,'LIB_DIR',os.path.join(slepc.prefixdir,'lib'))
if slepc.isrepo:
AddDefine(slepcconf,'VERSION_GIT',slepc.gitrev)
AddDefine(slepcconf,'VERSION_DATE_GIT',slepc.gitdate)
AddDefine(slepcconf,'VERSION_BRANCH_GIT',slepc.branch)
# Create global configuration file for the case of empty PETSC_ARCH
if emptyarch:
globconf = slepc.CreateFile(os.path.join(slepc.dir,'lib','slepc','conf'),'slepcvariables')
globconf.write('SLEPC_DIR = '+slepc.dir+'\n')
globconf.write('PETSC_ARCH = '+archname+'\n')
globconf.close()
# Check if PETSc is working
log.NewSection('Checking PETSc installation...')
if petsc.nversion > slepc.nversion:
log.Warn('PETSc version '+petsc.version+' is newer than SLEPc version '+slepc.version)
if slepc.release=='1' and not petsc.release=='1':
log.Exit('A release version of SLEPc requires a release version of PETSc, not a development version')
if slepc.release=='0' and petsc.release=='1':
if not 'slepc' in petsc.packages:
log.Exit('A development version of SLEPc cannot be built with a release version of PETSc')
if petsc.isinstall:
if os.path.realpath(petsc.prefixdir) != os.path.realpath(petsc.dir):
log.Warn('PETSC_DIR does not point to PETSc installation path')
petsc.Check()
if not petsc.havepackage:
log.Exit('Unable to link with PETSc')
# Single library installation
if petsc.singlelib:
slepcvars.write('SHLIBS = libslepc'+slepc.slepcLibExt+'\n')
slepcvars.write('LIBNAME = '+os.path.join('${INSTALL_LIB_DIR}','libslepc'+slepc.slepcLibExt+'.${AR_LIB_SUFFIX}')+'\n')
slepcvars.write('SLEPC_LIB_EXT = '+slepc.slepcLibExt+'\n')
for module in ['SYS','EPS','SVD','PEP','NEP','MFN','LME']:
slepcvars.write('SLEPC_'+module+'_LIB = ${CC_LINKER_SLFLAG}${SLEPC_LIB_DIR} -L${SLEPC_LIB_DIR} -lslepc'+slepc.slepcLibExt+' ${SLEPC_EXTERNAL_LIB} ${PETSC_SNES_LIB}\n')
slepcvars.write('SLEPC_LIB = ${CC_LINKER_SLFLAG}${SLEPC_LIB_DIR} -L${SLEPC_LIB_DIR} -lslepc'+slepc.slepcLibExt+' ${SLEPC_EXTERNAL_LIB} ${PETSC_SNES_LIB}\n')
# Check for external packages and for missing LAPACK functions
for pkg in checkpackages:
pkg.Process(slepcconf,slepcvars,slepcrules,slepc,petsc,archdir)
# Write Modules and pkg-config configuration files
log.NewSection('Writing various configuration files...')
log.write('Modules file in '+modulesdir)
if slepc.isinstall:
WriteModulesFile(modules,slepc.lversion,slepc.prefixdir)
else:
WriteModulesFile(modules,slepc.lversion,slepc.dir)
log.write('pkg-config file in '+pkgconfdir)
WritePkgconfigFile(pkgconfig,slepc.lversion,petsc.version,slepc.dir,slepc.isinstall,slepc.prefixdir,petsc.singlelib)
# Write reconfigure file
if not slepc.isinstall:
WriteReconfigScript(reconfig,slepc.dir,argdb.UsedArgs())
try:
os.chmod(reconfigpath,0o775)
except OSError as e:
log.Exit('Unable to make reconfigure script executable:\n'+str(e))
# Finish with configuration files (except slepcvars)
slepcrules.close()
slepcconf.write('\n#endif\n')
slepcconf.close()
pkgconfig.close()
modules.close()
if not slepc.isinstall: reconfig.close()
# Download sowing if requested and make Fortran stubs if necessary
bfort = petsc.bfort
if sowing.downloadpackage:
bfort = sowing.DownloadAndInstall(slepc,petsc,archdir)
if slepc.isrepo and petsc.fortran:
try:
if not os.path.exists(bfort):
bfort = os.path.join(archdir,'bin','bfort')
if not os.path.exists(bfort):
bfort = sowing.DownloadAndInstall(slepc,petsc,archdir)
log.NewSection('Generating Fortran stubs...')
log.write('Using BFORT='+bfort)
sys.path.insert(0, os.path.abspath(os.path.join('lib','slepc','bin','maint')))
import generatefortranstubs
generatefortranstubs.main(slepc.dir,bfort,os.getcwd(),0)
generatefortranstubs.processf90interfaces(slepc.dir,0)
except:
log.Exit('Try configuring with --download-sowing or use a git version of PETSc')
if bfort != petsc.bfort:
slepcvars.write('BFORT = '+bfort+'\n')
# Finally we can close the slepcvariables file
slepcvars.close()
# Print summary
log.NewSection('')
log.Println('')
log.Println('='*80)
log.Println('SLEPc Configuration')
log.Println('='*80)
log.Println('\nSLEPc directory:\n '+slepc.dir)
if slepc.isrepo:
log.Println(' It is a git repository on branch: '+slepc.branch)
if slepc.isinstall:
log.Println('SLEPc prefix directory:\n '+slepc.prefixdir)
log.Println('PETSc directory:\n '+petsc.dir)
if petsc.isrepo:
log.Println(' It is a git repository on branch: '+petsc.branch)
if slepc.isrepo and petsc.branch!='release' and slepc.branch!='release':
try:
import dateutil.parser, datetime
petscdate = dateutil.parser.parse(petsc.gitdate)
slepcdate = dateutil.parser.parse(slepc.gitdate)
if abs(petscdate-slepcdate)>datetime.timedelta(days=30):
log.Warn('Your PETSc and SLEPc repos may not be in sync (more than 30 days apart)')
except ImportError: pass
if emptyarch and slepc.isinstall:
log.Println('Prefix install with '+petsc.precision+' precision '+petsc.scalar+' numbers')
else:
log.Println('Architecture "'+archname+'" with '+petsc.precision+' precision '+petsc.scalar+' numbers')
for pkg in checkpackages:
pkg.ShowInfo()
log.write('\nFinishing Configure Run at '+time.ctime(time.time()))
log.write('='*80)
print()
print('xxx'+'='*74+'xxx')
print(' Configure stage complete. Now build the SLEPc library with:')
if emptyarch:
print(' make SLEPC_DIR='+slepc.dir+' PETSC_DIR='+petsc.dir)
else:
print(' make SLEPC_DIR='+slepc.dir+' PETSC_DIR='+petsc.dir+' PETSC_ARCH='+archname)
print('xxx'+'='*74+'xxx')
print()
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