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#!/usr/bin/make -f
include /usr/share/dpkg/pkg-info.mk
%:
dh $@
execute_before_dh_auto_build:
$(MAKE) MANIFEST.txt SLF4J_LOGGER=nop
echo ' /usr/share/java/smiles-scripts.jar \r' >> MANIFEST.txt
override_dh_auto_test:
dh_auto_test -- tests
cat debian/failing-tests | xargs rm
find tests/outputs -name '*.diff' -a -size +0 | xargs --no-run-if-empty -i echo FAILED: {}
find tests/outputs -name '*.diff' -a -size +0 | xargs --no-run-if-empty false # Detect test failures
# 'make install' is not required
override_dh_auto_install:
execute_before_dh_installman:
help2man bin/cdkcif2sdf --name 'convert CIF to SDF' --no-info > cdkcif2sdf.1
help2man bin/cdkcif2smiles --name 'convert CIF to SMILES' --no-info > cdkcif2smiles.1
help2man bin/cdkcif2xyz --name 'convert CIF to XYZ' --no-info > cdkcif2xyz.1
help2man bin/cdkdepict --name 'draw SVG image for SMILES' --no-info > cdkdepict.1
help2man bin/cdkrecharge --name 'adjust charges in SMILES' --no-info > cdkrecharge.1
help2man bin/cdksdf2smiles --name 'convert SDF to SMILES' --no-info > cdksdf2smiles.1
PERL5LIB=lib/perl5 help2man scripts/smi_canonicalise \
--name 'canonicalise SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > smi_canonicalise.1
PERL5LIB=lib/perl5 help2man scripts/smi_isomorphism \
--name 'detect isomorphism between SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > smi_isomorphism.1
PERL5LIB=lib/perl5 help2man scripts/sdf-to-smi \
--name 'convert SDF to SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > sdf-to-smi.1
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