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#!/usr/bin/make -f
include /usr/share/dpkg/pkg-info.mk
%:
dh $@
execute_before_dh_auto_build:
cp MANIFEST.txt MANIFEST.txt.bak
head -n 2 MANIFEST.txt.bak > MANIFEST.txt
echo "Class-Path: \r" >> MANIFEST.txt
awk '{ print " " $$_ " \r" }' debian/classpath >> MANIFEST.txt
mkdir jars
grep '^ ' MANIFEST.txt | sed 's/[\r ]//g' | xargs -i ln -s {} jars
override_dh_auto_build:
dh_auto_build -- MODULE_BUILD_PARSE_YAPP= CHEMISTRY_OPENSMILES= MAKEFILE_PL_FILES= BUILD_PL_FILES=
override_dh_auto_test:
cat debian/failing-tests | xargs --no-run-if-empty rm -f
dh_auto_test -- MODULE_BUILD_PARSE_YAPP= CHEMISTRY_OPENSMILES= MAKEFILE_PL_FILES= BUILD_PL_FILES=
find tests/outputs -name '*.diff' -a -size +0 | xargs --no-run-if-empty -i echo FAILED: {} | sort
find tests/outputs -name '*.diff' -a -size +0 | xargs --no-run-if-empty false # Detect test failures
# 'make install' is not required
override_dh_auto_install:
override_dh_installman:
help2man bin/cdkcif2sdf --name 'convert CIF to SDF' --no-info > cdkcif2sdf.1
help2man bin/cdkcif2smiles --name 'convert CIF to SMILES' --no-info > cdkcif2smiles.1
help2man bin/cdkcif2xyz --name 'convert CIF to XYZ' --no-info > cdkcif2xyz.1
help2man bin/cdkdepict --name 'draw SVG image for SMILES' --no-info > cdkdepict.1
help2man bin/cdkrecharge --name 'adjust charges in SMILES' --no-info > cdkrecharge.1
help2man bin/cdksdf2inchi --name 'convert SDF to InChI' --no-info > cdksdf2inchi.1
help2man bin/cdksdf2smiles --name 'convert SDF to SMILES' --no-info > cdksdf2smiles.1
PERL5LIB=lib/perl5 help2man scripts/cml-to-smi \
--name 'convert CML to SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > cml-to-smi.1
PERL5LIB=lib/perl5 help2man scripts/smi_canonicalise \
--name 'canonicalise SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > smi_canonicalise.1
PERL5LIB=lib/perl5 help2man scripts/smi_check \
--name 'warn about unusual features in SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > smi_check.1
PERL5LIB=lib/perl5 help2man scripts/smi_check_racemate \
--name 'output chirality status for SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > smi_check_racemate.1
PERL5LIB=lib/perl5 help2man scripts/smi_chemical_formula \
--name 'compute chemical formula from SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > smi_chemical_formula.1
PERL5LIB=lib/perl5 help2man scripts/smi_isomorphism \
--name 'detect isomorphism between SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > smi_isomorphism.1
PERL5LIB=lib/perl5 help2man scripts/sdf-to-smi \
--name 'convert SDF to SMILES' \
--version-string "$(DEB_VERSION_UPSTREAM)" --no-info > sdf-to-smi.1
dh_installman
execute_before_dh_auto_clean:
test -e MANIFEST.txt.bak && mv MANIFEST.txt.bak MANIFEST.txt || true
execute_before_dh_clean:
rm -rf jars
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