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Source: smrtanalysis
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Afif Elghraoui <afif@debian.org>
Build-Depends: debhelper (>= 9)
Standards-Version: 3.9.8
Homepage: http://www.pacb.com/products-and-services/analytical-software/smrt-analysis/
Vcs-Git: https://anonscm.debian.org/git/debian-med/smrtanalysis.git
Vcs-Browser: https://anonscm.debian.org/git/debian-med/smrtanalysis.git
Package: smrtanalysis
Architecture: all
Depends:
${misc:Depends},
pbbamtools,
pbh5tools,
pbbarcode,
pbalign,
blasr,
pbdagcon,
pbgenomicconsensus,
kineticstools,
falcon,
Description: software suite for single molecule, real-time sequencing
SMRT® Analysis is a powerful, open-source bioinformatics software suite
available for analysis of DNA sequencing data from Pacific Biosciences’
SMRT technology. Users can choose from a variety of analysis protocols that
utilize PacBio® and third-party tools. Analysis protocols include de novo
genome assembly, cDNA mapping, DNA base-modification detection, and
long-amplicon analysis to determine phased consensus sequences.
.
This is a metapackage that depends on the components of SMRT Analysis.
Package: smrtanalysis-dev
Section: libdevel
Architecture: all
Depends:
${misc:Depends},
python-pbcore,
python-pbcommand,
python-pbconsensuscore | python3-pbconsensuscore,
python-pbgenomicconsensus,
python-pbh5tools,
python-pbalign,
python-kineticstools,
libpbseq-dev,
libpbbam-dev,
Description: develepment libraries for smrtanalysis
SMRT® Analysis is a powerful, open-source bioinformatics software suite
available for analysis of DNA sequencing data from Pacific Biosciences’
SMRT technology. Users can choose from a variety of analysis protocols that
utilize PacBio® and third-party tools. Analysis protocols include de novo
genome assembly, cDNA mapping, DNA base-modification detection, and
long-amplicon analysis to determine phased consensus sequences.
.
This is a metapackage that depends on the SMRTAnalysis development tools.
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