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import os
import sys
sys.path.insert(0, os.path.dirname(__file__))
from common import *
# run tibanna test before any moto-related tests because they apparently render AWS environment variables invalid or uneffective.
def test_tibanna():
workdir = dpath("test_tibanna")
subprocess.check_call(["python3", "cleanup.py"], cwd=workdir)
os.environ["TEST_ENVVAR1"] = "test"
os.environ["TEST_ENVVAR2"] = "test"
run(
workdir,
use_conda=True,
default_remote_prefix="snakemake-tibanna-test/1",
tibanna=True,
tibanna_sfn="tibanna_unicorn_johannes",
tibanna_config=["spot_instance=true"],
)
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