File: README.source

package info (click to toggle)
snakemake 7.32.4-8.1
  • links: PTS, VCS
  • area: main
  • in suites: sid
  • size: 25,836 kB
  • sloc: python: 32,846; javascript: 1,287; makefile: 247; sh: 163; ansic: 57; lisp: 9
file content (29 lines) | stat: -rw-r--r-- 847 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
Use of external Javascript etc (privacy issue):

- report.html, table.html, gui.html

Intentionally left unfixed for the time being: there is a risk that
using the version Debian has as libjs* instead of the version
specified by upstream will break things, and also reports might be
sent to people without snakemake installed.

Missing (optional) dependencies:

- conda (ITP #926416)
- gfal-copy and other gfal-* commands for gfal/gridftp (missing from gfal2?)

- setup.py-declared:
slacker
retry (ITP #961109)
crc32c, oauth2client, google-api-python-client, google-cloud-storage (google.cloud)
peppy, eido

- imports in snakemake directory (not tests/doc/examples) other than setup.py-declared depends:
XRootD
aioeasywebdav
moto (RFP #777089)
pysftp
tibanna
tes

drmaa is currently in Debian, but does not work due to #951704 and may be removed.