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[metadata]
name = snakemake
author = Johannes Köster
author_email = johannes.koester@tu-dortmund.de
project_urls =
Documentation = https://snakemake.readthedocs.io
Source = https://github.com/snakemake/snakemake
description = Workflow management system to create reproducible and scalable data analyses
long_description =
Snakemake is a workflow management system that aims to reduce the
complexity of creating workflows by providing a fast and comfortable
execution environment, together with a clean and modern specification
language in python style. Snakemake workflows are essentially Python
scripts extended by declarative code to define rules. Rules describe
how to create output files from input files.
long_description_content_type = text/markdown
license = MIT
classifiers =
Development Status :: 5 - Production/Stable
Environment :: Console
Intended Audience :: Science/Research
License :: OSI Approved :: MIT License
Natural Language :: English
Programming Language :: Python :: 3 :: Only
Programming Language :: Python :: 3.9
Programming Language :: Python :: 3.10
Programming Language :: Python :: 3.11
Topic :: Scientific/Engineering :: Bio-Informatics
[options]
zip_safe = False
include_package_data = False
packages = find:
python_requires = >=3.7
install_requires =
platformdirs
configargparse
connection_pool >=0.0.3
datrie
docutils
gitpython
humanfriendly
jinja2 >=3.0,<4.0
jsonschema
nbformat
packaging
psutil
pulp >=2.0
pyyaml
requests
retry
smart_open >=3.0
stopit
tabulate
throttler
toposort >=1.10
wrapt
yte >=1.5.1,<2.0
[options.extras_require]
google-cloud =
google-api-python-client
google-cloud-storage
google-crc32c
oauth2client
azure =
azure-storage-blob
azure-batch
azure-core
azure-identity
azure-mgmt-batch
messaging = slacker
pep =
eido
peppy
reports = pygments
[options.entry_points]
console_scripts =
snakemake = snakemake:main
snakemake-bash-completion = snakemake:bash_completion
[options.packages.find]
include = snakemake, snakemake.*
[options.package_data]
* = *.css, *.sh, *.html, *.jinja2, *.js, *.svg
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