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export DEB_BUILD_MAINT_OPTIONS = hardening=+all
include /usr/share/dpkg/default.mk
VERSION := $(shell echo $(DEB_VERSION_UPSTREAM) | sed -e 's/+dfsg//')
export DEB_CXXFLAGS_MAINT_APPEND=-std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP
%:
dh $@
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
dh_auto_test
./unit_tests
endif
override_dh_auto_build:
dh_auto_build
help2man --no-discard-stderr --no-info --version-string="${VERSION}" \
--name "scalable nucleotide alignment program" \
--help-option=" " ./snap-aligner > debian/snap-aligner.1
for option in index single paired; do help2man \
--no-discard-stderr --no-info --version-string="${VERSION}" \
--include=debian/snap-aligner-$${option}-man-include \
--help-option=" " "./snap-aligner $${option}" > \
debian/snap-aligner-$${option}.1; done
help2man --no-discard-stderr --no-info --version-string="${VERSION}" \
--name "scalable nucleotide alignment program" \
--help-option=" " ./SNAPCommand > debian/SNAPCommand.1
override_dh_auto_clean:
dh_auto_clean
rm -f debian/*.1
rm -f */*.d */*/*.d
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