1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
|
#!/usr/bin/make -f
#export DH_VERBOSE = 1
export DEB_BUILD_MAINT_OPTIONS = hardening=+all
INCLUDE_PATHS = /usr/include/bamtools
space=
space+=
%:
dh $@
override_dh_auto_configure:
dh_auto_configure -- \
-DCMAKE_INCLUDE_PATH="$(subst $(space),:,$(strip $(INCLUDE_PATHS)))"
override_dh_auto_clean:
dh_auto_clean
find -name "*.mk" -delete
rm -rf bin
$(RM) \
makefile \
debian/sniffles.1 \
test.vcf \
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
bin/sniffles-*/sniffles -m test_set/reads_region.bam -v test.vcf
endif
ifeq ($(filter nodoc,$(DEB_BUILD_PROFILES)),)
override_dh_installman: debian/sniffles.1
dh_installman $^
else
override_dh_installman: ;
endif
%.1: %.1.md
pandoc --from markdown --to man -s $< -o $@
|
