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Some scripts are requiring python-skbio but they are compatible
with version 0.2.3 and NOT with the version currently in Debian
which is 0.4.0.
You could try this by running
$ python3 tests/test_sortmerna.py
Traceback (most recent call last):
File "tests/test_sortmerna.py", line 16, in <module>
from skbio.parse.sequences import parse_fasta
ImportError: No module named parse.sequences
The module interface was changed inbetween python3-skbio version
0.2.3 and 0.4.0.
As a consequence the test is not run. If you might succeed in
adapting the code please add the Build-Depends python3-skbio and
python3-lockfile.
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