1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44
|
# Installing sourmash
This tutorial should run without modification on Linux or Mac OS X,
under [Miniforge](https://github.com/conda-forge/miniforge).
You'll need about 5 GB of free disk space.
## Install miniforge
If you don't have the `mamba` command installed, you'll need to install
[miniforge](https://github.com/conda-forge/miniforge#install).
On Linux, this should work:
```
curl -L -O "https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-$(uname)-$(uname -m).sh"
bash Miniforge3-$(uname)-$(uname -m).sh -b
~/miniforge3/bin/mamba init
echo 'source ~/.bashrc' > ~/.bash_profile
source ~/.bash_profile
```
otherwise, follow the instructions [here](https://github.com/conda-forge/miniforge#install).
## Install sourmash
To install sourmash, create a new environment named `smash` and install sourmash:
```
mamba create -y -n smash sourmash-minimal
```
and then activate:
```
conda activate smash
```
You should now be able to use the `sourmash` command:
```
sourmash info
```
Voila!
|