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spades 3.15.5%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 96,896 kB
  • sloc: cpp: 850,748; ansic: 156,813; python: 23,134; perl: 4,547; sh: 2,352; makefile: 1,273; java: 890; pascal: 875; xml: 19

Folder: assembler

d .. (parent)
d d rwxr-xr-x 135 biosynthetic_spades_hmms
d d rwxr-xr-x 107 configs
d d rwxr-xr-x 71 coronaspades_hmms
d d rwxr-xr-x 42 ext
d d rwxr-xr-x 4,096 src
d d rwxr-xr-x 4,096 test_dataset
d d rwxr-xr-x 50 test_dataset_plasmid
d d rwxr-xr-x 106 test_dataset_truspades
- - rw-r--r-- 3,055 .clang-format
- - rwxr-xr-x 261 .gitignore
- - rw-r--r-- 17,987 GPLv2.txt
- - rw-r--r-- 2,235 LICENSE
- - rw-r--r-- 7 VERSION
- - rw-r--r-- 13,362 changelog.html
- - rwxr-xr-x 528 changer_of_K.py
- - rwxr-xr-x 123 compare_saves.sh
- l rwxrwxrwx 9 coronaspades.py → spades.py
- - rwxr-xr-x 900 editcfg
- - rwxr-xr-x 1,125 makefile
- - rw-r--r-- 88,343 manual.html
- l rwxrwxrwx 9 metaplasmidspades.py → spades.py
- l rwxrwxrwx 9 metaspades.py → spades.py
- l rwxrwxrwx 9 metaviralspades.py → spades.py
- l rwxrwxrwx 9 plasmidspades.py → spades.py
- - rwxr-xr-x 984 prepare_cfg
- l rwxrwxrwx 9 rnaspades.py → spades.py
- - rw-r--r-- 8,624 rnaspades_manual.html
- l rwxrwxrwx 9 rnaviralspades.py → spades.py
- - rwxr-xr-x 1,070 run
- - rwxr-xr-x 4,705 show_saves.py
- - rwxr-xr-x 31,010 spades.py
- - rwxr-xr-x 6,642 spades_compile.sh
- - rwxr-xr-x 176 spades_dev.sh
- - rwxr-xr-x 1,645 spades_init.py
- - rwxr-xr-x 8,975 truspades.py
- - rw-r--r-- 10,821 truspades_manual.html