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Source: spoa
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
cmake,
d-shlibs,
libbioparser-dev (>= 3.0),
libcereal-dev,
libgtest-dev,
zlib1g-dev,
libsimde-dev,
libcpu-features-dev [any-amd64 any-i386]
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/spoa
Vcs-Git: https://salsa.debian.org/med-team/spoa.git
Homepage: https://github.com/rvaser/spoa
Rules-Requires-Root: no
Package: spoa
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Description: SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
Package: libspoa7.0.0
Architecture: any
Multi-Arch: same
Section: libs
Depends: ${shlibs:Depends},
${misc:Depends}
Description: SIMD partial order alignment library
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
.
This package contains the shared library.
Package: libspoa-dev
Architecture: any
Multi-Arch: same
Section: libdevel
Depends: ${shlibs:Depends},
${misc:Depends},
libspoa7.0.0 (= ${binary:Version}),
libcereal-dev
Description: SIMD partial order alignment library (development files)
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
.
This package contains the static library and the header files.
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